Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5g52A_

Fold library idPDB HeaderMoleculeTitle
c5g52A_3.80PDB header: virusChain: A: PDB Molecule: vp1;


Added to library: Sat Mar 25 08:55:05 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GEESRNTTVLDTTTTLQSSGFGRAFFGEAFNDLKTLMRRYQLYGQLLLSVTTDKDIDHCMFTFPCLPQGL
Predicted secondary structure








































SS confidence





































































Known secondary structure (DSSP)
TTT

S












TTTTTTSS
TT
SSSSS
S





SS
TT




TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence ALDIGSAGSPHEIFNRCRDGIIPLIASGYRFYRGDLRYKIVFPSNVNSNIWVQHRPDRRLEGWSAAKIVN
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP)





SSS

GGGTTTTS
SGGGBS





SS





TT



SSSSSS
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence CDAVSTGQGVYNHGYASHIQITRVNNVIELEVPFYNATCYNYLQAFNASSAASSYAVSLGEISVGFVNKP
Predicted secondary structure



















































SS confidence





































































Known secondary structure (DSSP)


TTSSTTS

SSS

TTT
S






SSS
B

SS


S
SSSSSSS






 .........220.........230.........240...
Sequence VTIYYSIGDGMQFSQWVGYQPMMILDQLPAPVV
Predicted secondary structure
















SS confidence
































Known secondary structure (DSSP)
TT

SB







GGGS





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D