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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5g4kB_

Fold library idPDB HeaderMoleculeTitle
c5g4kB_1.74PDB header: oxidoreductaseChain: B: PDB Molecule: oxidoreductase, short chain dehydrogenase/reductase


Added to library: Thu Feb 9 13:08:38 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MVNVKKEFVDNMFSVKGKVALVTGATGALGCVLSKAYGYAGAKVFMTGRNEKKLQALEAEFKAEGIDCAY
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Known secondary structure (DSSP)

S

TT

TT
STTSTT
S
TTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence GVADPADEAQVDAMITACVAQYGEVNILAVTHGFNKPQNILEQSVADWQYIMDADCKSVYVVCKYVAQQM
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Known secondary structure (DSSP)

TT
S











TTTS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence VDQGKGGKIVVVTSQRSKRGMAGYTGYCTSKGGADLMVSSMACDLSAKYGINVNSICPTVFRSDLTEWMF
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Known secondary structure (DSSP) TS


GGGTS

TT



BSTTTT
 .........220.........230.........240.........250.........260....
Sequence DPESAVYQNFLKREPIGRLAEPEDFVGYALFLSSDASNYITGANCDCSGGYLTC
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Known secondary structure (DSSP)
TT

T
TTSS
B
GGGGTTSGGGTT

S
STTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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