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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5g4gF_

Fold library idPDB HeaderMoleculeTitle
c5g4gF_7.80PDB header: hydrolaseChain: F: PDB Molecule: vcp-like atpase;


Added to library: Sat Jul 30 15:16:33 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GIILRVAEANSTDPGMSRVRLDESSRRLLDAEIGDVVEIEKVRKTVGRVYRARPEDENKGIVRIDSVMRN
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Known secondary structure (DSSP)








SS

SSTT

B

T

SS
GGG

B

SS

TT




 .........80.........90.........100.........110.........120.........130.........140
Sequence NCGASIGDKVKVRKVRTEIAKKVTLAPIIRKDQRLKFGEGIEEYVQRALIRRPMLEQDNISVPGLTLAGQ
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Known secondary structure (DSSP) TT

TT





B




SSS
S


SS
TTTTTSS

TT



S
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence TGLLFKVVKTLPSKVPVEIGEETKIEIREEPASEVLEEVSRISYEDIGGLSEQLGKIREMIELPLKHPEL
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Known secondary structure (DSSP)


SS
SS


TTS






SS

SS


TTT

S

TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence FERLGITPPKGVILYGPPGTGKTLIARAVANESGANFLSINGPEIMSKYYGQSEQKLREIFSKAEETAPS
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Known secondary structure (DSSP) SSSSSS




S
TTTT
S


TTS
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IIFIDEIDSIAPKREEVQGEVERRVVAQLLTLMDGMKERGHVIVIGATNRIDAIDPALRRPGRFDREIEI
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Known secondary structure (DSSP)
T


SSS


SS
S
SS

SSS
SS
GGGGSTTS




 .........360.........370.........380.........390.........400.........410.........420
Sequence GVPDRNGRKEILMIHTRNMPLGMSEEEKNKFLEEMADYTYGFVGADLAALVRESAMNALRRYLPEIDLDK
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Known secondary structure (DSSP)



TTSS

SSSSSSTTS

S

TT


S
 .........430.........440.........450.........460.........470.........480.........490
Sequence PIPTEILEKMVVTEDDFKNALKSIEPSSLREVMVEVPNVHWDDIGGLEDVKREIKETVELPLLKPDVFKR
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Known secondary structure (DSSP) S

ST



SS





SS

B




TTS

S

 .........500.........510.........520.........530.........540.........550.........560
Sequence LGIRPSKGFLLYGPPGVGKTLLAKAVATESNANFISIKGPEVLSKWVGESEKAIREIFKKAKQVAPAIVF
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Known secondary structure (DSSP) T




SSTTSSTT

TTTTTTT
TT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence LDEIDSIAPRRGTTSDSGVTERIVNQLLTSLDGIEVMNGVVVIGATNRPDIMDPALLRAGRFDKLIYIPP
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Known secondary structure (DSSP) SSGGGSTTTS

SSS



TTTS
SSSS
SS




SSSS


 .........640.........650.........660.........670.........680.........690.........700
Sequence PDKEARLSILKVHTKNMPLAPDVDLNDIAQRTEGYVGADLENLCREAGMNAYRENPDATSVSQKNFLDAL
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Known secondary structure (DSSP)

TTS


TTS





SSSSSSS
TT
S
S
 .........710.........720.
Sequence KTIRPSVDEEVIKFYRTLSET
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Known secondary structure (DSSP) S






Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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