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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5g2xC_

Fold library idPDB HeaderMoleculeTitle
c5g2xC_3.80PDB header: transferaseChain: C: PDB Molecule: group ii intron-encoded protein ltra;


Added to library: Sat May 21 08:53:41 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TMAILERISKNSQENIDEVFTRLYRYLLRPDIYYVAYQNLYSNKGASTKGILDDTADGFSEEKIKKIIQS
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Known secondary structure (DSSP)

TTTT
SS

SS
SSS
SSSSTTTTSS


SSSS

SSSS




SSSSSTTTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LKDGTYYPQPVRRMYIAKKNSKKMRPLGIPTFTDKLIQEAVRIILESIYEPVFEDVSHGFRPQRSCHTAL
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Known secondary structure (DSSP) S

SSS



B






SSS









TTGGGSTTTTTTS
SSSS
SS

SSSSTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KTIKREFGGARWFVEGDIKGCFDNIDHVTLIGLINLKIKDMKMSQLIYKFLKAGYLENWQYHKTYSGTPQ
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Known secondary structure (DSSP) SSSTTT

SS






S
SSSSS

STGGGTSS
SSS

SSTTSSTT

B
SSS


S
SS
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence GGILSPLLANIYLHELDKFVLQLKMKFDRESPERITPEKYVRYADDFIISVKGSKEDCQWIKEQLKLFIH
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Known secondary structure (DSSP)
TTTTTTTTTSSSS





B
SS
B


S


GGGGGG
 .........290.........300.........310.........320.........330.........340.........350
Sequence NKLKMELSEEKTLITHSSQPARFLGYDIRVVKKRTLNGSVELLIPLQDKIRQFIFDKKIAIQKKDSSWFP
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Known secondary structure (DSSP) TT



STTSS



S




STT









SSS



SSSSSSTTTTTT

B

SSSS
B
 .........360.........370.........380.........390.........400.........410.........420
Sequence VHRKYLIRSTDLEIITIYNSELRGICNYYGLASNFNQLNYFAYLMEYSCLKTIASKHKGTLSKTISMFKD
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Known secondary structure (DSSP)


S
SS
S
SSTSS

S
GGGTTTTTSS






SS
 .........430.........440.........450.........460.........470.........480......
Sequence GSGSWGIPYEIKQGKQRRVLYGYARNTLENRLKAKCCELCGTSDENTSYEIHHVNRKTLVVCFHCH
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Known secondary structure (DSSP) SS







SSS
SS



S
GGGS

SS

SSS



TTS














S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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