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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5fvcF_

Fold library idPDB HeaderMoleculeTitle
c5fvcF_4.17PDB header: viral proteinChain: F: PDB Molecule: hmpv nucleoprotein;


Added to library: Sat Feb 27 08:12:01 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QGIHLSDLSYKHAILKESQYTIKRDVGTTTAVTPSSLQQEITLLCGEILYAKHADYKYAAEIGIQYISTA
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Known secondary structure (DSSP)





TT


S


BSSS


GGGS

S

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGSERVQQILRNSGSEVQVVLTRTYSLDIHGVEKSWVEEIDKEARKTMATLLKESSGNIPQNQRPSAPDT
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Known secondary structure (DSSP)
TTTTB


B



B
TTS
TTT


GGGSTT
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence PIILLCVGALIFTKLASTIEVGLETTVRRANRVLSDALKRYPRMDIPKIARSFYDLFEQKVYHRSLFIEY
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Known secondary structure (DSSP) TTSS
T
TT


T
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKALGSSSTGSKAESLFVNIFMQAYGAGQTMLRWGVIARSSNNIMLGHVSVQAELKQVTEVYDLVREMGP
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Known secondary structure (DSSP)
SS

TTSS
S
TT
GGGGSTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ESGLLHLRQSPKAGLLSLANCPNFASVVLGNASGLGIIGMYRGRVPNTELFSAAESYAKSLKESNKINFS
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Known secondary structure (DSSP) TTGGGTTTT
TTTTTT


S
T

TT




S





 .........360......
Sequence SLGLTDEEKEAAEHFL
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Known secondary structure (DSSP) T

TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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