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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fqhA_

Fold library idPDB HeaderMoleculeTitle
c5fqhA_2.10PDB header: hydrolaseChain: A: PDB Molecule: beta-n-acetylgalactosaminidase;


Added to library: Sat Apr 9 08:40:08 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TTLGASIGSTDFHYLQKDYDEIKKLNLNTWNEVAWIGDELNSKIVMWTNSSPVNNVTLSSSDFINENGDL
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Known secondary structure (DSSP)


SSS


GGGTT



T

SS



TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence ISSNNIKISWLKETLANIGRSNPSAPLEPFPDIIHNSGSLNIEKNKIASAWINIKIPRNAKPGIYNGSIE
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Known secondary structure (DSSP)
GGG
SSS
TTS


SS

TT


TT


 .........150.........160.........170.........180.........190.........200.........210
Sequence VTADELEKSYTFDYSFEVLNLVQPLPSETNTQIEFWQHPYTIARYYKICKEDLFTEKHFKYLRGNLKEYR
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Known secondary structure (DSSP)
SS
SS


GGGS




TT

GGGTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NMGGRGVIATIVHEAWNHQSYDSDPSMIKWRKNSYGTFEFDYSHFDKWIQLNIDLGILDPEKGFGQIKCY
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Known secondary structure (DSSP) TT


STTTTTT
SSS



SS
TTS

TTS
BTTTTBS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SIVPWNNRIQYFNEATNKEEAINPTPGSDLWINIWTQFLTSFMSHLEEKGWFNITYISMNQRSMDDLKAC
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Known secondary structure (DSSP)
SS
GGG
TTTT


TTST
GGG

S

 .........360.........370.........380.........390.........400.........410.........420
Sequence VDLIENITNNSYEHFKISSAMDYESGNDYSFLDRIDDISIGLSHINHNSDDMKNMATHRQELGLLTTIYT
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Known secondary structure (DSSP)


TT






S



TTGGGSSGGG

TT
STT

 .........430.........440.........450.........460.........470.........480.........490
Sequence CTGDYPSSFTISDPSEGAFTIWYSLYQNTNGFLRWSWDGWVENPLENVSYKYWEPGDPFLIYPAEKDSIG
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Known secondary structure (DSSP)
TT
SS


TTS
TTT
SS
SB


S
TTTB


SSSSTTTTBSS

TT
SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence KTFYSTPRLEKLKEGIRDINKAKYLMEKAPNLKNSIENLIYSLKRPNKGENAYGSAVAASKEDRDLTISE
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Known secondary structure (DSSP)
SB

GGGT





TTS
SS
 .........570.........580.
Sequence ANRIKNGINNFAREFISLTME
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Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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