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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fq3B_

Fold library idPDB HeaderMoleculeTitle
c5fq3B_3.10PDB header: membrane proteinChain: B: PDB Molecule: bt_2262;


Added to library: Thu Feb 9 16:21:20 2017
 
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 1........10.........20.........30.........40.........50.........60.........70
Sequence FVTLEREGDEKIVLEKGQPFVEPGYYAEMNGEDITESVQIKGSVDVNTPGIYNLVYAAYNEDGFAKTFTR
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Known secondary structure (DSSP)

S
STT






TT
GGG




TTS

TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence TVYVADNTASPLKSGIYTVAEGSKRTAPSVVAFSGYEIVIFQMEPGIFYISDFLGGWYDQRAGYGPDYAM
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Known secondary structure (DSSP)




SS


SS
SS




SSSSS
TTTTTTTTSS


TTSS
 .........150.........160.........170.........180.........190.........
Sequence VGKFELNDDNTITPLESYVAGWGDSMDQMTNTLLDPATGTLKWTVAYAGQLSFDIIVKQ
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Known secondary structure (DSSP) B
TTS



B
TTS



S

TTT
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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