Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fodB_

Fold library idPDB HeaderMoleculeTitle
c5fodB_1.70PDB header: ligaseChain: B: PDB Molecule: leucyl-trna synthetase;


Added to library: Sat Jun 25 08:20:14 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QEYTLIKIFVSNVKDFYSIFMNSIRSSQSVLNACTFFTDFEKGEEDLKNKIWNEDFFVKDKKVIFLGSTL
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP)
S
TTT


S



TT
SSTT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence KPETAYGQNYTFINPNEYYYLTLGFDKQNLHYGDKSYVNNIMTKEEIINSCPNIYVCSENSLYNLAYQGI
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP)
GGGGGG


TTS
SS
GGGGS

S







TTTTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IPLLKNKNGNLDDVFILNKIKGEHFVGLETYTNISKIKNLYILPMTTIKMNISTGIVPCVSSDSTDDYAC
Predicted secondary structure



































SS confidence





































































Known secondary structure (DSSP) S
TT

SSSTTS

SGGGGTT

SS
S
S

TT

TTSTTS
TTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LEDIRKKKNYYCEKYNLKEEQLKNNSESCIELPEIGNNTGKYYYEKEKVSSYKDVKLQKIKEVLYKKQYF
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) TSS

GGGG






BTTTBS
TT


TT
TT
 .........290.........300.........310......
Sequence EGIMTVDPYKGMKTFNCRKLAKQNIIRNLDGFLYSE
Predicted secondary structure
















SS confidence



































Known secondary structure (DSSP)

STTSTTSBTTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D