PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5fnpB_

Fold library id	PDB Header	Molecule	Title
c5fnpB_	1.80	PDB header: oxidoreductase	Chain: B: PDB Molecule: iron-sulfur cluster repair protein ytfe;

Links to external resources
Added to library: Sat Apr 30 11:28:31 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y R D Q P L G E L A L S I P R A S A L F R K Y D M D Y A A G G K Q T L A R A A A R K E L D V E V I E A E L E K D W R S A P L A E I I D H I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S B S T T T T
T T T S T T S B T T
G G G S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence V R Y H D R H R E Q L P E L I L Q A T K V E R V H A D K P S V P K G L T K Y L T M L H E E L S S H M M K E E Q I L F P M I K Q G M G S Q A M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S T T S
T T T T T
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G P I S V M E S E H D E A G E L L E V I K H T T N N V T P P P E A C T T W K A M Y N G I N E L I D D L M D H I S L E N N V L F P R A L A G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
T T
T T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	R	D	Q	P	L	G	E	L	A	L	S	I	P	R	A	S	A	L	F	R	K	Y	D	M	D	Y	A	A	G	G	K	Q	T	L	A	R	A	A	A	R	K	E	L	D	V	E	V	I	E	A	E	L	E	K	D	W	R	S	A	P	L	A	E	I	I	D	H	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	B								S	T	T								T	T			T	T	T	S	T	T	S	B								T	T														G	G	G	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	V	R	Y	H	D	R	H	R	E	Q	L	P	E	L	I	L	Q	A	T	K	V	E	R	V	H	A	D	K	P	S	V	P	K	G	L	T	K	Y	L	T	M	L	H	E	E	L	S	S	H	M	M	K	E	E	Q	I	L	F	P	M	I	K	Q	G	M	G	S	Q	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T																						T	T	T	S	T	T	S		T	T																						T							T	T		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	P	I	S	V	M	E	S	E	H	D	E	A	G	E	L	L	E	V	I	K	H	T	T	N	N	V	T	P	P	P	E	A	C	T	T	W	K	A	M	Y	N	G	I	N	E	L	I	D	D	L	M	D	H	I	S	L	E	N	N	V	L	F	P	R	A	L	A	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T	T	T				T	T																													T							T	T