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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fn2B_

Fold library idPDB HeaderMoleculeTitle
c5fn2B_PDB header: hydrolaseChain: B: PDB Molecule: presenilin-1;PDBTitle: cryo-em structure of gamma secretase in complex with a drug dapt


Added to library: Sat Dec 19 08:27:11 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GAKHVIMLFVPVTLCMVVVVATIKSVSFYTRKDGQLIYTPFTEDTETVGQRALHSILNAAIMISVIVVMT
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Known secondary structure (DSSP)


SSTTS


S

SS




S

 .........80.........90.........100.........110.........120.........130.........140
Sequence ILLVVLYKYRCYKVIHAWLIISSLLLLFFFSFIYLGEVFKTYNVAVDYITVALLIWNFGVVGMISIHWKG
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Known secondary structure (DSSP) S


T



S

 .........150.........160.........170.........180.........190.........200.........210
Sequence PLRLQQAYLIMISALMALVFIKYLPEWTAWLILAVISVTDLVAVLCPKGPLRMLVETAQERNETLFPALI
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Known secondary structure (DSSP)
S
TTSSS

SSSS


 .........220.........230.........240.........250.........260.........270.........280
Sequence YGVKLGLGDFIFYSVLVGKASATASGDWNTTIACFVAILIGLCLTLLLLAIFKKALPALPISITFGLVFY
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Known secondary structure (DSSP)





S
SST
SSSTT
 .........290.........300.
Sequence FATDYLVQPFMDQLAFHQFYI
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Known secondary structure (DSSP) T




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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