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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fmrC_

Fold library idPDB HeaderMoleculeTitle
c5fmrC_2.00PDB header: transport proteinChain: C: PDB Molecule: intraflagellar transport protein component ift52;


Added to library: Sat Mar 12 08:30:55 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EVRILFSTAKGESHTHKAGFKQLFRRLRSTYRPDKVDKDDFTLDTLRSAHILVLGGPKEKFTAPEVDMLK
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Known secondary structure (DSSP)


TT

SSBTTTB
TTS
GGG
ST
SS

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence KFVKNGGSILILMSEGGEEKAGTNINYFLEQFGMSVNNDAVVRTTHYKYLHPKEVLISDGILNRAVITDE
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Known secondary structure (DSSP) TT


TTT

TTTT
S


SS

SS

TTSS
B
SGGGT


 .........150.........160.........170.........180.........190.........200.........210
Sequence FRVFDGTGLEYVFPFGATLSVQKPAVPVLSSGKIAYPMNRPVGAVWAQPGYGRIAVLGSCAMFDDKWLDK
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Known secondary structure (DSSP) TT


S
S

S



TTS

TTSTT

TTS
S
SGGGSTTTTTS
 .........220.........230.........240....
Sequence EENSKIMDFFFKFLEPHSKIQLNDIDAEEPDVSD
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Known secondary structure (DSSP) TTSTT





S
S



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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