PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5fmgU_

Fold library id	PDB Header	Molecule	Title
c5fmgU_	3.60	PDB header: hydrolase	Chain: U: PDB Molecule: proteasome component c8, putative;

Links to external resources
Added to library: Sat Mar 5 10:13:24 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y D L S V S T F S P D G R L Y Q V E Y I Y K S I N N N N T A L C L E C K D G I I C C C I N S N M I K K N S Y N R I Y H V N N N I I I T Y S G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S
T T S
S
T T
-
S
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F D G D A R N I I D R A R S E A N T Y Y Y N F H T N I P L H I L V N R I S L Y I H A Y T L Y W H M R P F A A S I I I S S F N E K D K G D I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
S S S
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence C I E P N G A C Y K Y S G I V I G K N K E M F K T E I E K K D Y K D I N V R D A I E D I Y K F I L L V N F S W I C K E S S Y E F Q N I H E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S
B
S S S
-
S S
-
B S T T T T T S

. . . . . . . . .

Sequence I L T P A L N K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
-

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	D	L	S	V	S	T	F	S	P	D	G	R	L	Y	Q	V	E	Y	I	Y	K	S	I	N	N	N	N	T	A	L	C	L	E	C	K	D	G	I	I	C	C	C	I	N	S	N	M	I	K	K	N	S	Y	N	R	I	Y	H	V	N	N	N	I	I	I	T	Y	S	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S	S	S			T	T	S															S									T	T							-								S								S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	D	G	D	A	R	N	I	I	D	R	A	R	S	E	A	N	T	Y	Y	Y	N	F	H	T	N	I	P	L	H	I	L	V	N	R	I	S	L	Y	I	H	A	Y	T	L	Y	W	H	M	R	P	F	A	A	S	I	I	I	S	S	F	N	E	K	D	K	G	D	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	S																				T		S	S	S														S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	C	I	E	P	N	G	A	C	Y	K	Y	S	G	I	V	I	G	K	N	K	E	M	F	K	T	E	I	E	K	K	D	Y	K	D	I	N	V	R	D	A	I	E	D	I	Y	K	F	I	L	L	V	N	F	S	W	I	C	K	E	S	S	Y	E	F	Q	N	I	H	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S						S		B			S	S	S							-											S	S												-						B	S	T	T	T	T	T	S
	.	.	.	.	.	.	.	.	.
Sequence	I	L	T	P	A	L	N	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									-