PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5fmgQ_

Fold library id	PDB Header	Molecule	Title
c5fmgQ_	3.60	PDB header: hydrolase	Chain: Q: PDB Molecule: proteasome subunit alpha type;

Links to external resources
Added to library: Sat Mar 5 08:27:19 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence T T T F S P E G R L Y Q V E Y A L E A I N N A S I T I G L I T K D G V I L G A D K Y E K I Y K I D K H I F C G V A G L N A D A N I L I N Q S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S
B T S
S S
-
S S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R L Y A Q R Y L Y N Y N E V Q P V S Q L V V Q I C D I K Q S Y T Q Y G G L R P Y G V S F L I G G Y D T K D G Y Q L Y H T D P S G N Y S G W F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S S S S
G G G
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A T A I G T N N L T A S S V L K Q E W K N D M T L E E G L L L A L K T L A K S T D T E I P K S E K I E L A Y L T N K D G E V Y Q K Y L T E K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
S
-
S
S S S
-
S S
T T S T

. . . . . . . . . 220

Sequence E I E E L I K L Y T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
-

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	T	T	T	F	S	P	E	G	R	L	Y	Q	V	E	Y	A	L	E	A	I	N	N	A	S	I	T	I	G	L	I	T	K	D	G	V	I	L	G	A	D	K	Y	E	K	I	Y	K	I	D	K	H	I	F	C	G	V	A	G	L	N	A	D	A	N	I	L	I	N	Q	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B		S	S	S		B												T	S									S	S						-									S	S	S	S								S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	L	Y	A	Q	R	Y	L	Y	N	Y	N	E	V	Q	P	V	S	Q	L	V	V	Q	I	C	D	I	K	Q	S	Y	T	Q	Y	G	G	L	R	P	Y	G	V	S	F	L	I	G	G	Y	D	T	K	D	G	Y	Q	L	Y	H	T	D	P	S	G	N	Y	S	G	W	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S																				S	S	S	S	S														G	G	G									T	T							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	T	A	I	G	T	N	N	L	T	A	S	S	V	L	K	Q	E	W	K	N	D	M	T	L	E	E	G	L	L	L	A	L	K	T	L	A	K	S	T	D	T	E	I	P	K	S	E	K	I	E	L	A	Y	L	T	N	K	D	G	E	V	Y	Q	K	Y	L	T	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	T	T											S			S																-			S		S	S					S						-			S	S						T	T	S	T
	.	.	.	.	.	.	.	.	.	220
Sequence	E	I	E	E	L	I	K	L	Y	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T						-