Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fmgD_

Fold library idPDB HeaderMoleculeTitle
c5fmgD_3.60PDB header: hydrolaseChain: D: PDB Molecule: proteasome subunit alpha type;


Added to library: Sat Mar 5 08:31:24 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TVFSPDGHLLQVEHALEAVKKGGCAVAIKSSNFAVLAVEKKNIPKLQNPKTTEKLIKLDEHNCLAFAGLN
Predicted secondary structure
































SS confidence





































































Known secondary structure (DSSP)

B
TT

BTS


SS






-

TTSSSS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ADARVLVNKTRLECQRYYLNMDEPAPVDYIAKYVAKVQQKFTHRGGVRPFGIATLIAGFEICIYQTEPSG
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) SSS


SSSS




-




TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence IYAAWKAQAIGKNAKIVQEFLEKNYQENMEQKDCIFLALKAINVEVALLTEKDLTFIEEQEINSMVELID
Predicted secondary structure















SS confidence





































































Known secondary structure (DSSP)
SSTTSS

SS

TT
-

TT

TGGG
 .....
Sequence QERTK
Predicted secondary structure

SS confidence




Known secondary structure (DSSP)

-


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D