PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5fmgB_

Fold library id	PDB Header	Molecule	Title
c5fmgB_	3.60	PDB header: hydrolase	Chain: B: PDB Molecule: proteasome subunit alpha type 2, putative;

Links to external resources
Added to library: Sat Mar 5 08:32:04 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence S F S L T T F S P T G K L V Q I E Y A L N R V S S S S P A L G I R A K N G V I I A T E K E L I E E N S I F K I Q Q I S E H I G I V Y A G M P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
B
T T S
B T S
T T
-
G G G
S
S S S S
-
B
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G D F R V L L K R A R K E A I R Y S L Q Y G S E I L V K E L V K I I A S I V Q E F T Q T G G V R P F G L S L L I C G V D V Y G Y H L Y Q I D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P S G C Y F N W M A T C V G K D Y Q N N M S F L E K R Y N K D I E I E D A I H T A I L T L K N I E I G V A Y D N K P F K I L T Q N E I K D Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S B
-
S S T T S G G G
S
-
-
S
T T

. .

Sequence L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) -

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	S	F	S	L	T	T	F	S	P	T	G	K	L	V	Q	I	E	Y	A	L	N	R	V	S	S	S	S	P	A	L	G	I	R	A	K	N	G	V	I	I	A	T	E	K	E	L	I	E	E	N	S	I	F	K	I	Q	Q	I	S	E	H	I	G	I	V	Y	A	G	M	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S			B		T	T	S		B												T	S									T	T					-								G	G	G			S				S	S	S	S			-		B		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	D	F	R	V	L	L	K	R	A	R	K	E	A	I	R	Y	S	L	Q	Y	G	S	E	I	L	V	K	E	L	V	K	I	I	A	S	I	V	Q	E	F	T	Q	T	G	G	V	R	P	F	G	L	S	L	L	I	C	G	V	D	V	Y	G	Y	H	L	Y	Q	I	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																					S	S	S																					S	T	T															S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	G	C	Y	F	N	W	M	A	T	C	V	G	K	D	Y	Q	N	N	M	S	F	L	E	K	R	Y	N	K	D	I	E	I	E	D	A	I	H	T	A	I	L	T	L	K	N	I	E	I	G	V	A	Y	D	N	K	P	F	K	I	L	T	Q	N	E	I	K	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S						S	B		-			S	S					T	T	S	G	G	G							S													-								-			S											T	T
	.	.
Sequence	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	-