PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5fmgA_

Fold library id	PDB Header	Molecule	Title
c5fmgA_	3.60	PDB header: hydrolase	Chain: A: PDB Molecule: proteasome subunit alpha, putative;

Links to external resources
Added to library: Sat Mar 5 08:24:41 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y D R H L T I F S P D G N L Y Q I E Y A I K A V K N T N I T S V G V K G E N C A V I I S Q K K K L L D Y N N I T N I Y N I T D E I G C S M V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G T T
T T S
S T S
T T
-
S
T T T
S
B S S S S
B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G M P G D C L S M V Y K A R S E A S E F L Y S N G Y N V N A E T L C R N I C D K I Q V Y T Q H A Y M R L H A C S G M I I G I D E N N K P E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S S S S
-
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F K F D P S G F C A G Y R A C V I G N K E Q E S I S V L E R L L E K R D I R N T T I L A I E A L Q T I E I E V A I V S T K N R N F T Q I S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
S T T T
- T T
-
B
-
S S S S
B
S

. . . . . . . . .

Sequence K E I D N Y L T Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
-

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	D	R	H	L	T	I	F	S	P	D	G	N	L	Y	Q	I	E	Y	A	I	K	A	V	K	N	T	N	I	T	S	V	G	V	K	G	E	N	C	A	V	I	I	S	Q	K	K	K	L	L	D	Y	N	N	I	T	N	I	Y	N	I	T	D	E	I	G	C	S	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	T	T				T	T	S			S											T	S										T	T						-						S		T	T	T			S			B	S	S	S	S		B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	M	P	G	D	C	L	S	M	V	Y	K	A	R	S	E	A	S	E	F	L	Y	S	N	G	Y	N	V	N	A	E	T	L	C	R	N	I	C	D	K	I	Q	V	Y	T	Q	H	A	Y	M	R	L	H	A	C	S	G	M	I	I	G	I	D	E	N	N	K	P	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S																							S	S																					S	S	S	S												-			S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	K	F	D	P	S	G	F	C	A	G	Y	R	A	C	V	I	G	N	K	E	Q	E	S	I	S	V	L	E	R	L	L	E	K	R	D	I	R	N	T	T	I	L	A	I	E	A	L	Q	T	I	E	I	E	V	A	I	V	S	T	K	N	R	N	F	T	Q	I	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S							S					S	S		S	T	T	T								-	T	T															-							B		-			S	S	S	S			B			S
	.	.	.	.	.	.	.	.	.
Sequence	K	E	I	D	N	Y	L	T	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T							-