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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c5flmI_ | 3.40 | PDB header: transcription | Chain: I: PDB Molecule: dna-directed rna polymerase ii subunit rpb9; |
Added to library: Sat Jan 23 08:28:02 2016 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | V | G | I | R | F | C | Q | E | C | N | N | M | L | Y | P | K | E | D | K | E | N | R | I | L | L | Y | A | C | R | N | C | D | Y | Q | Q | E | A | D | N | S | C | I | Y | V | N | K | I | T | H | E | V | D | E | L | T | Q | I | I | A | D | V | S | Q | D | P | T | L | P | R | T |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | S | S | B | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | S | S | S | S | G | G | G | T | G | G | G | G | G | T | T | S | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . |
Sequence | E | D | H | P | C | Q | K | C | G | H | K | E | A | V | F | F | Q | S | H | S | A | R | A | E | D | A | M | R | L | Y | Y | V | C | T | A | P | H | C | G | H | R | W | T | E | ||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | S | T | T | T | ![]() | ![]() | ![]() |
Download: | PDB structure | FASTA sequence |
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