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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fl3A_

Fold library idPDB HeaderMoleculeTitle
c5fl3A_PDB header: transport proteinChain: A: PDB Molecule: pili retraction protein pilt;PDBTitle: pilt2 from thermus thermophilus


Added to library: Sat Nov 14 08:28:31 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QSLVEMLKAMVQARASDIHLQAGAPPTVRIDGKLRPFGNRPLTPKEVEAIARALLTPEQLEELEYRKEMD
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Known secondary structure (DSSP)
TT
STTS

TTSSSS


S
TT
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FAYTIPGVARFRCNLLRQRGSFGLVMRVVSEVIPSFEALGLPREVMESLAAKERGLILVTGPTGSGKSTT
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Known secondary structure (DSSP) TTTTTB




T


SS
STTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAALIDHINLHYAKNIITIEDPIEFLHKHKKSLVVQREVGLDTDSFYTGLKYALRQDPDVIMVGEMRDRE
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Known secondary structure (DSSP)


SS

B



SSSBTTTBS
TTS

SS


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence TVEAALMAAQTGHLVLSTLHTLDAWRTINRIIDFFPLHEHRQVRVLLAESLLGILSQRLLPKADGQGRVL
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Known secondary structure (DSSP) T


SSTTS
GGG
SSSSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALEILIATPYVRELLKDEEKTPQIKEAMMEGSLYGMRTFDQHLVELYTEGLISLEDALSAATSPHEFRLL
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Known secondary structure (DSSP)


TTTGGGT
TTTT
B
TTSS

SS
 ....
Sequence LTKA
Predicted secondary structure

SS confidence



Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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