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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fjsB_

Fold library idPDB HeaderMoleculeTitle
c5fjsB_2.60PDB header: hydrolaseChain: B: PDB Molecule: glucosylceramidase;


Added to library: Sat May 21 08:51:51 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHKIDIPDSAWTIGIGEKFKNAGHPNVKYPMIDDSYVQGAPLGGFGAGTIGRTYNGGFSRWHLEIGKNKY
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Known secondary structure (DSSP)

SS


TTSTT


TT


BSSSS





S





TTS


TTS


STT

 .........80.........90.........100.........110.........120.........130.........140
Sequence TTVYANQFSVQVLYAGGYLSSWKWDYPKESGMYYALYPNSWYTYTNVQLAVKQFSPIIPYNYKETSYPVA
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TT


B






TTS




SSSTT







TT
SSGGG

 .........150.........160.........170.........180.........190.........200.........210
Sequence VFKWTAYSIMFTWQNMIGFNSGNFDSEIVVMGNISNWNGEYSIGVKKVPGKAKFVTDGSDLWEFSKNDNK
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Known secondary structure (DSSP)




TT


S




B

B

S




B











TTT




-


 .........220.........230.........240.........250.........260.........270.........280
Sequence DDEPTKQGIGSAIAVNFKLQPGQTIEVPFALSWDLPIMKFGGGDKWYKMYTKYFGKNGKNSFAILKEALN
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TT

B




TTS
TT
SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence NYQKWEKMIDDWQKPILSNKSKPDWYKTALFNELYYLADGGTAWENGKVGETNNMFGLLECFDYNYYETL
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Known secondary structure (DSSP) T
TTS
TTTT
S






BS
SSS

BT
 .........360.........370.........380.........390.........400.........410.........420
Sequence DVRFYGSFPLVMLWPDIEKQVMRQFADTINVQDSSEFKVGSNGAMAVKKVQGMIPHDLGSSYALPWIKIN
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Known secondary structure (DSSP) T
TT


TTT


TT


S
S

TTS
TTTS

 .........430.........440.........450.........460.........470.........480.........490
Sequence AYDWQNPNIWKDLNSKYVLLVYRDYVLTGKTDKEFLKYTWKSVKTALDKLKEMDKDNDGIPDNEGIPDQT
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Known secondary structure (DSSP)


SS
GGG
SSTTTS

TT
SSSSSS



SS
 .........500.........510.........520.........530.........540.........550.........560
Sequence YDTWSMKGTSAYCGSLWLAALKAAQEIGKVLKDNEAYIKYNEWYKIAQQNFEKELWNGEYYNFDTESDHK
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Known secondary structure (DSSP) STTS
SBTT
B
SSSB
SBSSSTTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence DSIMADQLAGQWYADILRLGDILPKDHVQKALKKIYEFNVMKFENGKMGAVNGMRPDGIVDESDIQAQEV
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Known secondary structure (DSSP) T
TTTTTT


SS
TTTTTSGGGSS

BS
TTSSB

SSTGGG
 .........640.........650.........660.........670.........680.........690.........700
Sequence WTGVTYALASFMKYRGMTEEAYNTAYGVYKMTYDKSGKGYWFRTPEAWTKDGNYRASMYMRPLSIWSMEV
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Known secondary structure (DSSP) TT
STTS


TT


S
TT

SSS
SGGGGGGGGG
 ..
Sequence NY
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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