Fold library entry viewer: c5firC_

Added to library: Sat Jan 23 08:38:46 2016
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	A	F	F	R	W	L	T	K	K	Y	P	A	T	V	V	N	A	N	E	D	R	P	V	D	C	T	Q	P	N	P	N	F	Q	E	F	D	N	L	Y	L	D	X	N	G	I	I	H	P	C	T	H	P	E	D	R	P	A	P	K	N	E	D	E	X	F	A	L	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	G	G	G												T	T	S			S	S	S	S			S						S									S		S	S	S				S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	Y	I	D	R	I	Y	S	I	V	R	P	R	R	L	L	Y	X	A	I	D	G	V	A	P	R	A	K	X	N	Q	Q	R	S	R	R	F	R	A	S	K	E	X	A	E	K	E	A	S	I	E	E	Q	R	N	R	L	X	A	E	G	I	A	V	P	P	H	F	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S																																														S	S									G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	C	I	T	P	G	T	P	F	X	A	R	L	A	D	A	L	R	Y	Y	I	H	D	R	V	T	N	D	A	S	W	A	N	I	E	I	I	L	S	D	A	N	V	P	G	E	G	E	H	K	I	X	D	Y	V	R	K	Q	R	G	N	P	A	H	D	P	N	T	V	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G		S	T	T	S																						G	G	G	G	G								T	T	S		S															T	S	T	T	S		T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	L	C	G	A	D	A	D	L	I	X	L	G	I	A	T	H	E	A	N	F	N	I	I	R	E	E	F	V	Q	R	E	K	N	F	I	F	L	R	I	P	V	L	R	E	Y	L	E	K	E	L	S	X	P	N	L	P	F	K	F	D	V	E	R	A	L	D	D	W	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T										T		S	S								S	S		S	S																						T	T		S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	F	L	C	F	F	V	G	N	D	F	L	P	H	L	P	S	L	E	I	R	E	G	A	I	D	R	L	I	K	L	Y	K	E	X	V	Y	Q	X	K	G	Y	L	T	K	D	G	I	P	E	L	D	R	V	E	X	I	X	K	G	L	G	R	V	E	D	E	I	F	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								B	T	T	B				T	T			G	G	G	T																		S		S			T	T																	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	Q	Q	D	D	I	R	L	Y	E	S	G	W	K	D	R	Y	Y	R	A	K	F	D	V	G	S	D	D	I	E	F	R	H	R	V	A	W	A	Y	V	E	G	L	C	W	V	L	R	Y	Y	Y	Q	G	C	A	S	W	D	W	Y	F	P	Y	H	Y	A	P	F	A	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T						T	T	S	T	T										T				S	S																										S		S		S	S						S	S				G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	D	F	E	T	V	G	E	F	Q	P	D	F	T	R	P	T	K	P	F	N	P	L	E	Q	L	X	S	V	F	P	A	A	S	K	Q	H	L	P	V	E	W	Q	K	L	X	I	Q	D	D	S	P	I	I	D	L	Y	P	A	D	F	R	I	D	L	N	G	K	K	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T	G	G	G							S																	G	G	G	G	G	G	S							T	T	T		T	T		T	T	G	G	G			S							T	T		S	S	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	W	Q	G	V	A	L	L	P	F	V	D	E	T	R	L	L	A	T	L	Q	S	V	Y	P	T	L	T	A	E	E	K	Q	R	N	T	R	G	P	N	R	I	F	I	G	R	N	H	K	S	F	E	F	F	Q	Q	V	A	E	S	K	S	D	D	L	V	P	L	D	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	S																		T	T	G	G	G									T	S										T	T	S	T	T											T			S						G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.
Sequence	L	L	N	G	V	S	G	K	I	A	Y	D	S	T	A	T	A	P	G	L	P	F	V	S	P	V	N	H	D	E	C	Q	D	L	P	T	N	C	G	I	C	V	L	Y	E	D	P	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T	T	T									T	T	S			T	T	S		B			S	S		S	T	T				B	S	S

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PDB structure

FASTA sequence

Hidden Markov model

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