Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fguA_

Fold library idPDB HeaderMoleculeTitle
c5fguA_1.90PDB header: metal binding, dna binding proteinChain: A: PDB Molecule: green fluorescent protein,extracellular streptodornase d;


Added to library: Sat Apr 9 08:37:18 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KGEELFTGVVPILVELDGDVNGHKFSVSGEGEGDATYGKLTLKFICTTGKLPVPWPTLVTTFVQCFARYP
Predicted secondary structure


























SS confidence





































































Known secondary structure (DSSP)

GGGGSS
TTTTTTTTSS
SS
GGGGTTT

GGG
B

 .........80.........90.........100.........110.........120.........130.........140
Sequence DHMKQHDFFKSAMPEGYVQERTIFFKDDGNYKTRAEVKFEGDTLVNRIELKGIDFKEDGNILGHKLEYNY
Predicted secondary structure




























SS confidence





































































Known secondary structure (DSSP) GGGGGG
TTTT
TTS
TTS

TTSTTTTT
B
S

 .........150.........160.........170.........180.........190.........200.........210
Sequence NSHNVYIMADKQKNGIKVNFKIRHNIEDGSVQLADHYQQNTPIGDGPVLLPDNHYLSTQSALSKDPNEKR
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP)

GGGTBTTS
SSSS





S

TT

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DHMVLLEFVTAAGIAAAGKAQLDIKNFPELYRTTERVYKKSGQSTKPVTVSNIHYSVLDGYGRSGEAYGI
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) SS

SSBS



GGGS


TSSS









TTS



 .........290.........300.........310.........320.........330.........340.........350
Sequence ITKDMIDMSASKPEPSGWYSYFFKNTNQRATESDYKHSPKNVSKISNNIKASILLSNGNVRNGYLFDRSG
Predicted secondary structure














































SS confidence





































































Known secondary structure (DSSP)






TTSTTT



TTT



TTS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence LIADSLGGRPFRNNLITGTRTQNVGNNDRKGGMQYIENKVLDHIKRNPKVHVYYKATPVYQGSELLPRAV
Predicted secondary structure






























SS confidence





































































Known secondary structure (DSSP) SS
GGGT



GGGTTSSSSSSTT



TT
SS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence LVSALSSDGFIDETVRVFNNVAGFNIDYQNGGLLSSSLQDTVYVNGQSDVYWYNKDSMEMSEQVALTRGK
Predicted secondary structure






















SS confidence





































































Known secondary structure (DSSP) TTSS



TT

B
TTTSSB





S

B




SBS
TT

--
TT
 ....
Sequence HHST
Predicted secondary structure



SS confidence



Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D