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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fg3A_

Fold library idPDB HeaderMoleculeTitle
c5fg3A_1.90PDB header: translationChain: A: PDB Molecule: probable translation initiation factor if-2;


Added to library: Sat May 7 08:37:43 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RLRQPIVVVLGHVDHGKTTLLDKIRRTAVAAKEAGGITQHIGASIVPADVIEKIAEPLKKVIPVKLVIPG
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Known secondary structure (DSSP)
B



STTSS

SS


B
SSTGGGTTTS




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LLFIDTPGHELFSNLRRRGGSVADFAILVVDIMEGFKPQTYEALELLKERRVPFLIAANKIDRIPGWKPN
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Known secondary structure (DSSP) SS
SSTTS
STTT


TT


GGGSTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence PDAPFIETIRRQDPKVREILEQRVYEIVGKMYEAGLPAELFTRIKDFRRKIAIVPVSARTGEGIPELLAV
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Known secondary structure (DSSP) TT

TTS
TT

GGG
S
TTTS

TTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence LAGLTQTYLKERLRYAEGPAKGVVLEVKEMQGFGTVVDAVIYDGVLKKEDIIVVGGREGPIVTRVRALLM
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Known secondary structure (DSSP)
TTTTB


SB
TTTSTT
TT
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence PAPLQDIRSREARFVQVDRVYAAAGVRIAAPGLDDVIAGSPIYAAESEEEARKLMEAVQREIEELRFRTE
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Known secondary structure (DSSP)

TTSGGGSS

SSS
TT
TTB
TT
SSS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence NIGVVVKADTLGTLEALVEALRRRGVPVRLADIGPVSRSDVLDAAVTRKIDPYLGVVLAFNVKVLPEAEE
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Known secondary structure (DSSP) SS
SST

SSB

GGG
S

B
 .........430.........440.........450.........460.........470.........480.........490
Sequence EASRAGVKIFRESMIYKLIEDYEEWVKKEKEAERLKALNSLIRPGKFRILPGYVFRRSDPAIVGVEVLGG
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Known secondary structure (DSSP) T
SSTTS


SBSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence VIRPGYPVMDSQGRELGRIMAIKDRDRSLEEARLGAAVAVSIQGRILIGRHANEGDILYTNVPAQHAYKI
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Known secondary structure (DSSP)
TT

TT


SS
B
S
TT
SS
BBTTTB
TT



 .........570.........580.........590........
Sequence LTEFKDLVSKDELDVLREIAEIKRRAADHEYNKVLLRL
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Known secondary structure (DSSP) STTTS
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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