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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fg0B_

Fold library idPDB HeaderMoleculeTitle
c5fg0B_2.41PDB header: ligaseChain: B: PDB Molecule: e3 ubiquitin-protein ligase listerin;


Added to library: Sat Jul 9 08:25:55 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence TDLGLGHNGVRISLNYFDGLPDPSLLNSLYSNELKLIFKSLLKRDETTKEKALMDLSNLISDFNQNEYFF
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Known secondary structure (DSSP)


BT

SSS
B
SSSSSS


TTSSSSSS

TTTTTTS
TTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NDIFLLCWSQIYAKLIISDYKVIRLQSHQITIMLVKSLRKKISKFLKDFIPLILLGTCELDYSVSKPSLN
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Known secondary structure (DSSP) STT
SSSTTTTGGGT
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence ELTECFNKDPAKINALWAVFQEQLLNLVKEIVVNENEDTISDERYSSKEESEFRYHRVIASAVLLLIKLF
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Known secondary structure (DSSP) TTT
TTT

S
TTTS
 .........220.........230.........240.........250.........260.........270.........280
Sequence VHNKDVSERNSSSLKVILSDESIWKLLNLKNGQNTNAYETVLRLIDVLYTRGYMPSHKNIMKLAVKKLLK
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Known secondary structure (DSSP) S
TTSSSTTGGG


SSSS

TTSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SLTHITSKNILKVCPVLPSILNLLATLDDYEDGTIWSYDKSSKEKVLKFLSVSRTSPSPGFFNAVFALYS
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Known secondary structure (DSSP) GGG

TTTGGGTTTTTTGGGGG
TTTTS

TT
 .........360.........370.........380.........390.........400.......
Sequence STKRHSFLDYYLEWLPFWQKSVQRLNEKGFSARNSAEVLNEFWTNFLKFAEDSSEER
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Known secondary structure (DSSP) GGGT
S
TTTTS
SSSTTGGGTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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