PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5fcdA_

Fold library id	PDB Header	Molecule	Title
c5fcdA_	2.10	PDB header: transferase	Chain: A: PDB Molecule: mccd;

Links to external resources
Added to library: Sat Jan 2 08:31:21 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D N T P P G A E Y T I D Y W I K H G C I N K K S H L L D L A C S T G F S S R E C F K K E G A S A E G I D I S E S A V X V A N E K A K K L K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T
T
T T T
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N N L L K Y Y V A D A C D L P F E D N T F T H V L G G C N F A F I Q N R L I A L N E T H R C L N H X G S X C I S N F Y Y R R K I S D K L I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T
B T T B
S
T T
T G G G T S S S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D V Y N A I N F R P N P L W T L E Y W H Q F F S E R F T L V S E E N H E X E S Q S E D E L K A D I Y D Y I F N R Q N V F F E R F L K I R R P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T T

. . . . . . . . . 220 . . . . . . . .

Sequence L N I Q R D Y Q G V T L Q I W R K K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	N	T	P	P	G	A	E	Y	T	I	D	Y	W	I	K	H	G	C	I	N	K	K	S	H	L	L	D	L	A	C	S	T	G	F	S	S	R	E	C	F	K	K	E	G	A	S	A	E	G	I	D	I	S	E	S	A	V	X	V	A	N	E	K	A	K	K	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T												T			T	T							T		T	T	T																			S															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	N	L	L	K	Y	Y	V	A	D	A	C	D	L	P	F	E	D	N	T	F	T	H	V	L	G	G	C	N	F	A	F	I	Q	N	R	L	I	A	L	N	E	T	H	R	C	L	N	H	X	G	S	X	C	I	S	N	F	Y	Y	R	R	K	I	S	D	K	L	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T							B	T	T	B			S		T	T									T	G	G	G	T	S	S	S																										S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	V	Y	N	A	I	N	F	R	P	N	P	L	W	T	L	E	Y	W	H	Q	F	F	S	E	R	F	T	L	V	S	E	E	N	H	E	X	E	S	Q	S	E	D	E	L	K	A	D	I	Y	D	Y	I	F	N	R	Q	N	V	F	F	E	R	F	L	K	I	R	R	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S					T	T												T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Sequence	L	N	I	Q	R	D	Y	Q	G	V	T	L	Q	I	W	R	K	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G