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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fb5B_

Fold library idPDB HeaderMoleculeTitle
c5fb5B_3.50PDB header: viral proteinChain: B: PDB Molecule: distal tube protein;


Added to library: Sat Jun 25 08:17:10 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PLSGTNVRILADVPFSNDYKNTRWFTSSSNQYNWFNSKSRVYEMSKVTFMGFRENKPYVSVSLPIDKLYS
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Known secondary structure (DSSP)






TT
S

SSTS

S



SSS

SS
STT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence ASYIMFQNADYGNKWFYAFVTELEFKNSAVTYVHFEIDVLQTWMFDIKFQESFIVREHVKLWNDDGTPTI
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Known secondary structure (DSSP)
TTSTT



SSS
TTT





B
TTS
B

 .........150.........160.........170.........180.........190.........200.........210
Sequence NTIDEGLSYGSEYDIVSVENHKPYDDMMFLVIISKSIMHGTPGEEESRLNDINASLNGMPQPLCYYIHPF
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Known secondary structure (DSSP)





B


S

TTTT
SS


B
TT
SS

TT



BSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YKDGKVPKTYIGDNNANLSPIVNMLTNIFSQKSAVNDIVNMYVTDYIGLKLDYKNGDKELKLDKDMFEQA
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Known secondary structure (DSSP)
TTS


TT




TT
TTS

SS

TTTT
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence GIADDKHGNVDTIFVKKIPDYEALEIDTGDKWGGFTKDQESKLMMYPYCVTEITDFKGNHMNLKTEYINN
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Known secondary structure (DSSP)

SSS



B



TTTTS


SSGGGGSTTT
SSS

GGGBSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SKLKIQVRGSLGVSNKVAYSVQDYNADSALSGGNRLTASLDSSLINNNPNDIAILNDYLSAYLQGNKNSL
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Known secondary structure (DSSP) S


SSS


TTBT

TT

GGGGS



B



SSSTSSSS

T
 .........430.........440.........450.........460.........470.........480.........490
Sequence ENQKSSILFNGIMGMASSVTGMTSTAGNAVLQMQAMQAKQADIANIPPQLTKMGGNTAFDYGNGYRGVYV
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Known secondary structure (DSSP) TS

STTT


TT

SSS


TB








TTGGGTSS
TT

S
 .........500.........510.........520.........530.........540.........550.........560
Sequence IKKQLKAEYRRSLSSFFHKYGYKINRVKKPNLRTRKAFNYVQTKDCFISGDINNNDLQEIRTIFDNGITL
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Known secondary structure (DSSP)




SS
BSSS

SS

 .........570......
Sequence WHTDNIGNYSVENELR
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Known secondary structure (DSSP) SSSSTT
TTS


B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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