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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5fb4C_

Fold library idPDB HeaderMoleculeTitle
c5fb4C_2.04PDB header: viral proteinChain: C: PDB Molecule: distal tube protein;


Added to library: Sat Jun 25 08:16:25 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence AYVPLSGTNVRILADVPFSNDYKNTRWFTSSSNQYNWFNSKSRVYEMSKVTFMGFRENKPYVSVSLPIDK
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Known secondary structure (DSSP)



SS




TT
S

SSTS

B
TTTT

SS
GGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence LYSASYIMFQNADYGNKWFYAFVTELEFKNSAVTYVHFEIDVLQTWMFDIKFQESFIVREHVKLWNDDGT
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Known secondary structure (DSSP) GTT


TTSTT

TT
TTTT

S



B
TTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PTINTIDEGLSYGSEYDIVSVENHKPYDDMMFLVIISKSIMHGTPGEEESRLNDINASLNGMPQPLCYYI
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Known secondary structure (DSSP) B











S

TTTT
SS


B
TT
SS

TT



BSS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence HPFYKDGKVPKTYIGDNNANLSPIVNMLTNIFSQKSAVNDIVNMYVTDYIGLKLDYKNGDKELKLDKDMF
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Known secondary structure (DSSP)
TTS


TT





TTS

SS

TTTT
TTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence EQAGIADDKHGNVDTIFVKKIPDYEALEIDTGDKWGGFTKDQESKLMMYPYCVTEITDFKGNHMNLKTEY
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Known secondary structure (DSSP)

SSS



B




TTTTS


SSGGGGSTTT
SSS

GGG
 .........360.........370.........380.........390.........400.........410.........420
Sequence INNSKLKIQVRGSLGVSNKVAYSVQDYNADSALSGGNRLTASLDSSLINNNPNDIAILNDYLSGGNTAFD
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Known secondary structure (DSSP) BSSS


SSS


TTBT

TTS
GGGGS



B



STT




 .........430.........440.........450.........460.........470.........480.........490
Sequence YGNGYRGVYVIKKQLKAEYRRSLSSFFHKYGYKINRVKKPNLRTRKAFNYVQTKDCFISGDINNNDLQEI
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Known secondary structure (DSSP) TT

S




SS
BSSS


SS
 .........500.........510......
Sequence RTIFDNGITLWHTDNIGNYSVENELR
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SS confidence

























Known secondary structure (DSSP)

SSSTT
TTS


B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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