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| Protein Homology/analogY Recognition Engine V 2.2 | |||||||
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| Fold library id | PDB Header | Molecule | Title | 
|---|---|---|---|
| c5faiA_ | 1.80 | PDB header: transferase | Chain: A: PDB Molecule: ribosomal rna small subunit methyltransferase nep1; | 
| Added to library: Sat Jan 23 08:28:44 2016 | |
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| Links to external resources | |
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|   | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | 
| Sequence | N | K | I | G | G | R | R | L | I | V | V | L | E | G | A | S | L | E | T | V | K | V | G | K | T | Y | E | L | L | N | C | D | K | H | K | S | I | L | L | K | N | G | R | D | P | G | E | A | R | P | D | I | T | H | Q | S | L | L | M | L | M | D | S | P | L | N | R | A | G | L | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | |||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) | S | T | T |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |  |  |  |  | T | T | T | T | T | S | G | G | G | G | G | G |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  |  | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | 
| Sequence | L | Q | V | Y | I | H | T | Q | K | N | V | L | I | E | V | N | P | Q | T | R | I | P | R | T | F | D | R | F | C | G | L | M | V | Q | L | L | H | K | L | S | V | R | A | A | D | G | P | Q | K | L | L | K | V | I | K | N | P | V | S | D | H | F | P | V | G | C | M | K | V | G | 
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | |||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) |  |  |  |  |  |  |  | T | T | S |  |  |  |  | T | T | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |  |  |  | T | T | S | S |  |  |  |  |  |  | S | G | G | G | G | S | S | S |  |  |  |  |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 
| Sequence | T | S | F | S | I | P | V | V | S | D | V | R | E | L | V | P | S | S | D | P | I | V | F | V | V | G | A | F | A | H | G | K | V | S | V | E | Y | T | E | K | M | V | S | I | S | N | Y | P | L | S | A | A | L | T | C | A | K | L | T | T | A | F | E | E | V | W | G | V | I | |
| Predicted secondary structure |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | |||||||||||||||||||||||||||||||
| SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Known secondary structure (DSSP) |  | T | T | S | S | B | G | G | G | G | S | S | S |  |  |  |  |  |  |  | S | S | S | T | T | S |  |  |  | B | S | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | 
| Download: | PDB structure | FASTA sequence | 
| 
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