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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5faiA_

Fold library idPDB HeaderMoleculeTitle
c5faiA_1.80PDB header: transferaseChain: A: PDB Molecule: ribosomal rna small subunit methyltransferase nep1;


Added to library: Sat Jan 23 08:28:44 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NKIGGRRLIVVLEGASLETVKVGKTYELLNCDKHKSILLKNGRDPGEARPDITHQSLLMLMDSPLNRAGL
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Known secondary structure (DSSP)

STT



TT

TTT
TTS

GGG

GGG

STT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LQVYIHTQKNVLIEVNPQTRIPRTFDRFCGLMVQLLHKLSVRAADGPQKLLKVIKNPVSDHFPVGCMKVG
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Known secondary structure (DSSP) TTS

TT



SSS
TTSS

S
GGGGS
SS
 .........150.........160.........170.........180.........190.........200.........
Sequence TSFSIPVVSDVRELVPSSDPIVFVVGAFAHGKVSVEYTEKMVSISNYPLSAALTCAKLTTAFEEVWGVI
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Known secondary structure (DSSP)
TT
SSB

GGGG

SSS
SSS




TT
SB

SS


T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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