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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5f9yB_

Fold library idPDB HeaderMoleculeTitle
c5f9yB_2.80PDB header: ligaseChain: B: PDB Molecule: aminoacyl-trna synthetase;


Added to library: Thu Feb 9 11:09:23 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SLLGITADKITSFADWYSQVIVKSEMIEYYDISGCYILRPWSYFIWETIQSVFDQKIKQHDVQNAYFPIF
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Known secondary structure (DSSP)
TTS

S
TTTTTT

SSTT

TTT




S
 .........80.........90.........100.........110.........120.........130.........140
Sequence VTQKKLEEVAWVTKSSDLAEPIAIRPTSETIMYPYFAKWIRSHRDLPLKINQWTSIVRWEFKHPTPFIRT
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Known secondary structure (DSSP)






S
S

BGGG





S

BTTTB
 .........150.........160.........170.........180.........190.........200.........210
Sequence REFLWQEGHTAHSTRKEALEMVDIILNEYASIYEDLLATPVVKGTKSENEKFPGGDITKSIEGFIPEIGR
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Known secondary structure (DSSP) SSSTTS





TTTS
TT
STTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence AVQAATSHLLGQNFSKMFGVEFEDEKGNKEYAHQTSWGLTTRAIGVMIMTHGDNKGLVLPPKVAPVQVII
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Known secondary structure (DSSP) TT

SS


T
BTTB



TTT
S
S
 .........290.........300.........310.........320.........330.........340.........350
Sequence IPIIFKTVITEEQKKICNEVECILKKAGVRVKIDDRSNYTPGWKYNHWEVKGVCLRFEVGPRDIEKRSVR
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Known secondary structure (DSSP)

SSSS

TT




SSS
T
S
T
 .........360.........370.........380.........390.........400.........410.........420
Sequence VVVRDNMEKMDIPISELESKIPKLLEEFQNRLLFKAKQRQNESIIRVDTFDKVMDTLNQKKMVIAPWCED
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Known secondary structure (DSSP) TTT

GGG
SSGGGTTT



 .........430.........440.........450.........460........
Sequence VSCEEEIKKETARGAMKSLCIPNDQIFTKCFFCDKLAKKFTLFGRSYP
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Known secondary structure (DSSP)



SS



B
SSSSSB


B


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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