PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5f64C_

Fold library id	PDB Header	Molecule	Title
c5f64C_	2.71	PDB header: transcription regulator	Chain: C: PDB Molecule: positive transcription regulator evga;

Links to external resources
Added to library: Sat Jan 2 08:57:08 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A M N A I I I D D H P L A I A A I R N L L I K N D I E I L A E L T E G G S A V Q R V E T L K P D I V I I D V D I P G V N G I Q V L E T L R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S
S T T
S T T
S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R Q Y S G I I I I V S A K N D H F Y G K H C A D A G A N G F V S K K E G M N N I I A A I E A A K N G Y C Y F P F S L N R F V G S L T S D Q Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
T T T T
S G G G
T T T
B
G G G T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . .

Sequence K L D S L S K Q E I S V M R Y I L D G K D N N D I A E K M F I S N K T V S T Y K S R L M E K L E C K S L M D L Y T F A Q R N K I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
T
T
S T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	M	N	A	I	I	I	D	D	H	P	L	A	I	A	A	I	R	N	L	L	I	K	N	D	I	E	I	L	A	E	L	T	E	G	G	S	A	V	Q	R	V	E	T	L	K	P	D	I	V	I	I	D	V	D	I	P	G	V	N	G	I	Q	V	L	E	T	L	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S															T	T								S		S	T	T											S						T	T		S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	Q	Y	S	G	I	I	I	I	V	S	A	K	N	D	H	F	Y	G	K	H	C	A	D	A	G	A	N	G	F	V	S	K	K	E	G	M	N	N	I	I	A	A	I	E	A	A	K	N	G	Y	C	Y	F	P	F	S	L	N	R	F	V	G	S	L	T	S	D	Q	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T			S							S	S			T	T								T	T		S					G	G	G		T												T	T			B					G	G	G	T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
Sequence	K	L	D	S	L	S	K	Q	E	I	S	V	M	R	Y	I	L	D	G	K	D	N	N	D	I	A	E	K	M	F	I	S	N	K	T	V	S	T	Y	K	S	R	L	M	E	K	L	E	C	K	S	L	M	D	L	Y	T	F	A	Q	R	N	K	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S													T	T											T																		T			S											T	T