Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5f5mB_

Fold library idPDB HeaderMoleculeTitle
c5f5mB_2.90PDB header: nuclear proteinChain: B: PDB Molecule: nucleoprotein;


Added to library: Sat Jun 3 08:18:00 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence KKVILFDTNHQVSICNQIIDAINSGIDLGDLLEGGLLTLCVEHYYNSDKDKFNTSPIAKYLRDAGYEFDV
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP)

S
TT


GGGTT
TSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence IKNADATRFLDVIPNEPYSPLILALKTSTESQRGRIGLFLSFCSLFLPKLVVGDRASIEKALRQVTVHQE
Predicted secondary structure

















SS confidence





































































Known secondary structure (DSSP)
TT

SGGGGS




T






TTTGGGTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QGIVTYPNHWLTTGHMKVIFGILRSSFILKFVLIHQGVNLGHDAYDSIISNSVGQTRFSGLLIVKTVLEF
Predicted secondary structure











SS confidence





































































Known secondary structure (DSSP) TS



GGGSS
T



TTTTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ILQVTLHPLVRTSVKNEVASFKQALSNLARHGEYAPFARVLNLSGINNLEHGLYPQLSAIALGVATAHGS
Predicted secondary structure



















SS confidence





































































Known secondary structure (DSSP) TB


B


TTGGGGGGT
TT
TT

TTTST

 .........290.........300.........310.........320.........330....
Sequence NVGEQYQQLREAAHDAEVKLQRRHEHQEIQAIAEDDEERKILEQFHLQKTEITH
Predicted secondary structure





SS confidence





















































Known secondary structure (DSSP)


STTTT




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D