PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5f4tA_

Fold library id	PDB Header	Molecule	Title
c5f4tA_	3.08	PDB header: cell adhesion	Chain: A: PDB Molecule: izumo sperm-egg fusion protein 1;

Links to external resources
Added to library: Sat Jun 18 08:17:52 2016

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence C V I C D P S V V L A L K S L E K D Y L P G H L D A K H H K A M M E R V E N A V K D F Q E L S L N E D A Y M G V V D E A T L Q K G S W S L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G S T S
G G G S T T T T S
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence K D L K R I T D S D V K G D L F V K E L F W M L H L Q K E T F A T Y V A R F Q K E A Y C P N K C G V M L Q T L I W C K N C K K E V H A C R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S T T T S S
S B S T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S Y D C G E R N V E V P Q M E D M I L D C E L N W H Q A S E G L T D Y S F Y R V W G N N T E T L V S K G K E A T L T K P M V G P E D A G S Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S S
T T S
T T G G G
S
T T S
S
S S S
T T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . .

Sequence R C E L G S V N S S P A T I I N F H V T V L P G R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	C	V	I	C	D	P	S	V	V	L	A	L	K	S	L	E	K	D	Y	L	P	G	H	L	D	A	K	H	H	K	A	M	M	E	R	V	E	N	A	V	K	D	F	Q	E	L	S	L	N	E	D	A	Y	M	G	V	V	D	E	A	T	L	Q	K	G	S	W	S	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S														T					S		G	G	G	S												T	T	T	T	S				T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	K	D	L	K	R	I	T	D	S	D	V	K	G	D	L	F	V	K	E	L	F	W	M	L	H	L	Q	K	E	T	F	A	T	Y	V	A	R	F	Q	K	E	A	Y	C	P	N	K	C	G	V	M	L	Q	T	L	I	W	C	K	N	C	K	K	E	V	H	A	C	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			S	T	T																											T	S	S			S	B	S									T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	Y	D	C	G	E	R	N	V	E	V	P	Q	M	E	D	M	I	L	D	C	E	L	N	W	H	Q	A	S	E	G	L	T	D	Y	S	F	Y	R	V	W	G	N	N	T	E	T	L	V	S	K	G	K	E	A	T	L	T	K	P	M	V	G	P	E	D	A	G	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S										T	T	S									T	T	G	G	G			S											T	T	S									S		S					S	S			T	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
Sequence	R	C	E	L	G	S	V	N	S	S	P	A	T	I	I	N	F	H	V	T	V	L	P	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T