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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c5f1cA_

Fold library idPDB HeaderMoleculeTitle
c5f1cA_2.90PDB header: membrane proteinChain: A: PDB Molecule: putative uncharacterized protein;


Added to library: Sat Mar 19 08:20:33 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LNRLIQLLILGYIIGYVIIYQKGYQQFSTFNAATTTKVKGVVSTKNLSDDAFYPFLSDKTVYKRVWDIAD
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Known secondary structure (DSSP)





TTTT




TT

GGGB
TT
S

TTSSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence IVVPPEESNQFFVTTNLIITPSQEIKTCPEDPSIKEAHCKSENDTTSCTAGKSIMIGNGVMTGRCVQAAK
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Known secondary structure (DSSP) SSSS
BTT

TT
TTS

S
TT

SS

TT
B
TTSS

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence PQETLHVCEISGWCPVEQDYGPLKDGTPLLSDVQNFTVLIKNYIEFSLFHVRRSNLHDIENSTYLKYCRY
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Known secondary structure (DSSP) T
TTSS



S
SBSS


TTGGGGG
TTTTS

S


TT


 .........220.........230.........240.........250.........260.........270.........280
Sequence HPEKDPHCPVFRIGDMVDAAGEDFDDVAAKGGVIQVLISWDCNLDYDVKYCIPNYSFLRLDDPKTVLAKG
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Known secondary structure (DSSP) BTTTBTT

TT




TTS
STT



S
SS

SS
S
 .........290.........300.........310.........320.........330.........340...
Sequence WNFRYPKYYNEKERSLVKAYGITFVILVQGRAGKLSPIPIAINIGSGLGLMVVATVLCDLVVL
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Known secondary structure (DSSP)

SSS


TTS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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