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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ey8D_

Fold library idPDB HeaderMoleculeTitle
c5ey8D_PDB header: ligaseChain: D: PDB Molecule: acyl-coa synthase;PDBTitle: structure of fadd32 from mycobacterium smegmatis complexed to ampc20


Added to library: Sat Dec 19 19:40:16 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence FIKDGQIKFPDGSSIVAHVERWAKVRGDKLAYRFLDFSTERDGVPRDLTWAQFSARNRAVAARLQQVTQP
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Known secondary structure (DSSP)


TTS



SS

S
S

SSSSS


T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GDRVAILCPQNLDYLVAFFGALYAGRIAVPLFDPSEHVGRLHAVLDNCHPSAILTTTEAAEGVRKFFRTR
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Known secondary structure (DSSP) T


SST


TT




S
STTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PANQRPRVIAVDAVPDDVASTWVNPDEPDETTIAYLQYTSSTRIPTGVQITHLNLATNVVQVIEALEGEE
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Known secondary structure (DSSP)
SSS

GGGS
GGGGGG







TT



SS
T

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence GDRGLSWLPFFHDMGLITALLAPMIGHYFTFMTPAAFVRRPERWIRELARKEGDTGGTISVAPNFAFDHA
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Known secondary structure (DSSP) S



TTST




TS

TT
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence AARGVPKPGSPPLDLSNVKAVLNGSEPISAATVRRFNEAFGPFGFPPKAIKPSYGLAEATLFVSTTPSAE
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Known secondary structure (DSSP) T
S

TTS




TT

SS


GGGT

GGG
STTSS

TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence EPKIITVDRDQLNSGRIVEVDADSPKAVAQASAGKVGIAEWAVIVDAESATELPDGQVGEIWISGQNMGT
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Known secondary structure (DSSP)


TTTB

B

TTSSS



TTTTTT

TTB
TTS
S
 .........430.........440.........450.........460.........470.........480.........490
Sequence GYWGKPEESVATFQNILKSRTNPSHAEGATDDATWVRTGDYGAFYDGDLYITGRVKDLVIIDGRNHYPQD
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Known secondary structure (DSSP)
BTT





B

TT
TTTTS
TT


TTGGG
SSSS
 .........500.........510.........520.........530.........540.........550.........560
Sequence LEYSAQEASKAIRTGYVAAFSVPANQLPDEVFENAHSGIKRDPDDTSEQLVIVAERADIGPITDDIRAAI
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Known secondary structure (DSSP) TT
TTB
TT


SSS


STT




TT



B

 .........570.........580.........590.........600...
Sequence AVRHGVTVRDVLLTAAGAIPRTSSGKIGRRACRAAYLDGSLRA
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Known secondary structure (DSSP) T



TT
S
B
TTS
B
TTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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