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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5eufA_

Fold library idPDB HeaderMoleculeTitle
c5eufA_PDB header: hydrolaseChain: A: PDB Molecule: protease;PDBTitle: the crystal structure of a protease from helicobacter pylori


Added to library: Sat Dec 5 08:41:26 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence LPKHESVTLKNGLQVVSVPLKTGVIEVDVLYKVGSRNEVXGKSGIAHXLEHLNFKSTKNLKAGEFDKIVK
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Known secondary structure (DSSP)




TTS



SS

GGG

TTS
STTS

SS

TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RFGGVSNASTSFDITRYFIKTSEANLDKSLELFAETXGSLNLKEDEFLPERQVVAEERRWRTDNSPIGXL
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Known secondary structure (DSSP) TT

SS
GGGSS



TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence YFRFFNTAYVYHPYHWTPIGFXDDIQNWTLKDIKKFHSLYYQPKNAIVLVVGDVNSQKVFELTKKHFESL
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Known secondary structure (DSSP)
SSSGGGS
TT

T

TSGGGS

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence KNLDEKAIPTPYXKEPKQDGARTAVVHKDGVHLEWVALGYKVPAFKHKDQVALDALSKLLGEGKSSWLQS
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Known secondary structure (DSSP)

S
SS












S

TT

S


TT
TTSSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence ELVDKKRLASQAFSHNXQLQDESVFLFIAGGNPNIKAEALQKEIVALLEKLKKGEITQAELDKIKINQKA
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Known secondary structure (DSSP) TTTTS




SSS
TT

TT


 .........360.........370.........380.........390.........400.........410...
Sequence DFISNLESSSDVAGLFADYLVQNDLQGLTDYQQQFLDLKVSDLVRVANEYFKDTQSTTVFLKP
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Known secondary structure (DSSP) STTT
TT



GGG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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