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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5es8A_

Fold library idPDB HeaderMoleculeTitle
c5es8A_2.55PDB header: ligaseChain: A: PDB Molecule: linear gramicidin synthetase subunit a;


Added to library: Sat Jan 23 15:17:59 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MGRILFLTTFMSKGNKVVRYLESLHHEVVICQEKVHAQSANLQEIDWIVSYAYGYILDKEIVSRFRGRII
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Known secondary structure (DSSP)


SSS
TT
TT

S


TT
GGGTT

S

S


TTTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence NLHPSLLPWNKGRDPVFWSVWDETPKGVTIHLIDEHVDTGDILVQEEIAFADEDTLLDCYNKANQAIEEL
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Known secondary structure (DSSP) SS
TTSSSSTT




SSTT
S




TT
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence FIREWENIVHGRIAPYRQTAGGTLHFKADRDFYKNLNMTTVRELLALKRLCAEPKRGEKPIDKTFHQLFE
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Known secondary structure (DSSP) TT
S

B


S



GGGGGGGGGGTT
B



TT




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence QQVEMTPDHVAVVDRGQSLTYKQLNERANQLAHHLRGKGVKPDDQVAIMLDKSLDMIVSILAVMKAGGAY
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Known secondary structure (DSSP) STTSTTTT

TT


SSTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence VPIDPDYPGERIAYMLADSSAAILLTNALHEEKANGACDIIDVHDPDSYSENTNNLPHVNRPDDLVYVMY
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Known secondary structure (DSSP)

TTS
S



TTTGGGGTT
STT
GGGS
S

S






TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TSGSTGLAKGVMIEHHNLVNFCEWYRPYFGVTPADKALVYSSFSFDGSALDIFTHLLAGAALHIVPSERK
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Known secondary structure (DSSP)

SSSS
T

TT

S
TTSTTT


 .........430.........440.........450.........460.........470.........480.........490
Sequence YDLDALNDYCNQEGITISYLPTGAAEQFMQMDNQSFRVVITGGDVLKKIERNGTYKLYNGYGPTECTIMV
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Known secondary structure (DSSP) S
T



TSS


S
SSS






SSSS

GGGSS
S
 .........500.........510.........520.........530.........540.........550.........560
Sequence TMFEVDKPYANIPIGKPIDRTRILILDEALALQPIGVAGELFIVGEGLGRGYLNRPELTAEKFIVHPQTG
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Known secondary structure (DSSP)

S

SS


B
TT
TTS
B

TT

TT


TT

TTT
 .........570.........580.........590.........600.........610.........620.........630
Sequence ERMYRTGDRARFLPDGNIEFLGRLDNLVKIRGYRIEPGEIEPFLMNHPLIELTTVLAKEQADGRKYLVGY
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Known secondary structure (DSSP)

TTS
SSS
TT
TSTT


SSS
 .........640.........650.........660.........670.........680.........690.........700
Sequence YVAPEEIPHGELREWLGNDLPDYMIPTYFVHMKAFPLTANGKVDRRALPDVVAPTDELEQQLAQVWSHVL
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Known secondary structure (DSSP)
SS


TTS
GGGS
SSS



SSSS

GGGS





SST
 .........710.........720.........730.........740.........750.........
Sequence GIPQMGIDDHFLERGGDSIKVMQLIHQLKNIGLSLRYDQLFTHPTIRQLKRLLTEQAAA
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Known secondary structure (DSSP) T
SS

TTS
SGGGT

TS



S
STT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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