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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5er3A_

Fold library idPDB HeaderMoleculeTitle
c5er3A_PDB header: solute-binding proteinChain: A: PDB Molecule: sugar abc transporter, periplasmic sugar-binding protein;PDBTitle: crystal structure of abc transporter system solute-binding protein2 from rhodopirellula baltica sh 1


Added to library: Sat Nov 28 08:27:00 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GFPRQCGDYTVLGILTDNQDNSKAKENAETTLLRHPNVACLVGLWSQNTPXILAGLRSSDAIGKVAVVGF
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Known secondary structure (DSSP)

STT
TT

TT
STTTT
BTTB
 .........80.........90.........100.........110.........120.........130.........140
Sequence DEHPDTLAGIRDQSVYGTIVQQPYAFGYRSVQWLTTXAKGGEVEVPESGXIIIPHRSITGANVNEFAADI
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Known secondary structure (DSSP) S

TTSS


TT





TT



TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence DAIKSGKGPILSGEQQIDGSGVRVAYITNSLDPFWTLADAGCKRAAEQFGCEVDVQXPSSGSIEEQKRFL
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Known secondary structure (DSSP) TT



TTTT




TT

SSS
TT


TT

 .........220.........230.........240.........250.........260.........270.........280
Sequence ESNVAAKVDGIAISPIDPENQVAXINDACKVTPVICQDSDAPASRRKFYLGTSNYLAGRAAGKLIQEAIP
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Known secondary structure (DSSP) TT
S

SSGGG
TTS
SS

TTS

S



T
 .........290.........300.........310........
Sequence EGGEVXLFVGKXEVLNAQERSQGIXDELAGKPIPAILQ
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Known secondary structure (DSSP) T
S
TTSTT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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