Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5er0D_

Fold library idPDB HeaderMoleculeTitle
c5er0D_2.41PDB header: oxidoreductaseChain: D: PDB Molecule: nadh oxidase;


Added to library: Sat Apr 16 09:41:39 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SMKVTVVGCTHAGTFAIKQILAEHPDAEVTVYERNDVISFLSCGIALYLGGKVADPQGLFYSSPEELQKL
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)



SS
TT
SSS


B
TTTT

S
GGGGBS

T
 .........80.........90.........100.........110.........120.........130.........140
Sequence GANVQMNHNVLAIDPDQKTVTVEDLTNHAQTTESYDKLVMTSGSWPIVPKIPGIDSDRVKLCKNWAHAQA
Predicted secondary structure















































SS confidence





































































Known secondary structure (DSSP) T
STTTTTTT


S







TTTT
TT

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LIEDAKEAKRITVIGAGYIGAELAEAYSTTGHDVTLIDAMARVMPKYFDADFTDVIEQDYRDHGVQLALG
Predicted secondary structure































SS confidence





































































Known secondary structure (DSSP) TT
S

STT
SSSSSSTTT

TT
T
 .........220.........230.........240.........250.........260.........270.........280
Sequence ETVESFTDSATGLTIKTDKNSYETDLAILCIGFRPNTDLLKGKVDMAPNGAIITDDYMRSSNPDIFAAGD
Predicted secondary structure

























SS confidence





































































Known secondary structure (DSSP)

TTSS
S
S


GGGTTTS
B
TTS
B


TTSB
SSTT
GG
 .........290.........300.........310.........320.........330.........340.........350
Sequence SAAVHYNPTHQNAYIPLATNAVRQGILVGKNLVKPTVKYMGTQSSSGLALYDRTIVSTGLTLAAAKQQGL
Predicted secondary structure






































SS confidence





































































Known secondary structure (DSSP) GB
TTTT



SSSS

S



B


TT

TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence NAEQVIVEDNYRPEFMPSTEPVLMSLVFDPDTHRILGGALMSKYDVSQSANTLSVCIQNENTIDDLAMVD
Predicted secondary structure
























SS confidence





































































Known secondary structure (DSSP)

SS
TTSS



TTT
BSS

TT
BS
 .........430.........440.........450
Sequence MLFQPNFDRPFNYLNILAQAAQAKVAQSVN
Predicted secondary structure









SS confidence





























Known secondary structure (DSSP)



TTT

SS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Michael Sternberg 
Disclaimer
Terms and Conditions
Structural Biology Group logo Imperial logo
BBSRC logo
Phyre2 is part of Genome3D