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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5eoxB_

Fold library idPDB HeaderMoleculeTitle
c5eoxB_2.40PDB header: peptide binding proteinChain: B: PDB Molecule: type 4 fimbrial biogenesis protein pilm;


Added to library: Sat Apr 30 08:38:30 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HMLGLIKKNTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIVELEGVGQALSRVLVKA
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Known secondary structure (DSSP)




S





SS

-


TTSTT

 .........80.........90.........100.........110.........120.........130.........140
Sequence KTNLKSAVVAVAGSAVITKTIEMEAGLSEDELENQLKIEADQYIPYPLEEVAIDFEVQGLSARNPERVDV
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Known secondary structure (DSSP) T




GGG
TT


SS
GGG
SS
TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LLAACRKENVEVREAALALAGLTAKVVDVEAYALERSYALLSSQLGADTDQLTVAVVDIGATMTTLSVLH
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Known secondary structure (DSSP) TT

SS
TT

SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NGRTIYTREQLFGGRQLTEEIQRRYGLSVEEAGLAKKQGGLPDDYDSEVLRPFKDAVVQQVSRSLQFFFA
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Known secondary structure (DSSP) TTS

TT





TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence AGQFNDVDYIVLAGGTASIQDLDRLIQQKIGTPTLVANPFADMALNGKVNAGALASDAPALMIACGLALR
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Known secondary structure (DSSP) TSS



SSGGGGSTT
S


TTTT

TTS
GGGGG
 ...
Sequence SFD
Predicted secondary structure

SS confidence


Known secondary structure (DSSP) GG


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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