PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5elmB_

Fold library id	PDB Header	Molecule	Title
c5elmB_	PDB header: isomerase	Chain: B: PDB Molecule: asp/glu_racemase family protein;	PDBTitle: crystal structure of l-aspartate/glutamate specific racemase in2 complex with l-glutamate

Links to external resources
Added to library: Sat Nov 21 08:18:20 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M K T I G L L G G M S W E S T I P Y Y R L I N E G I K Q R L G G L H S A Q V L L H S V D F H E I E E C Q R R G E W D K T G D I L A E A A L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L Q R A G A E G I V L C T N T M H K V A D A I E S R C T L P F L H I A D A T G R A I T G A G M T R V A L L G T R Y T M E Q D F Y R G R L T E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
S G G G G G S
S
B
T T
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence Q F S I N C L I P E A D E R A K I N Q I I F E E L C L G Q F T E A S R A Y Y A Q V I A R L A E Q G A Q G V I F G S T E I G L L V P E E R S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T G G G T
T T
S T T S T T T S
G G G
S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . .

Sequence L P V F D T A A I H A E D A V A F M L S L E H H H E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	K	T	I	G	L	L	G	G	M	S	W	E	S	T	I	P	Y	Y	R	L	I	N	E	G	I	K	Q	R	L	G	G	L	H	S	A	Q	V	L	L	H	S	V	D	F	H	E	I	E	E	C	Q	R	R	G	E	W	D	K	T	G	D	I	L	A	E	A	A	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T																					T	T																						T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	Q	R	A	G	A	E	G	I	V	L	C	T	N	T	M	H	K	V	A	D	A	I	E	S	R	C	T	L	P	F	L	H	I	A	D	A	T	G	R	A	I	T	G	A	G	M	T	R	V	A	L	L	G	T	R	Y	T	M	E	Q	D	F	Y	R	G	R	L	T	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T							S		S	G	G	G	G	G								S		S		B														T	T								S							S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	Q	F	S	I	N	C	L	I	P	E	A	D	E	R	A	K	I	N	Q	I	I	F	E	E	L	C	L	G	Q	F	T	E	A	S	R	A	Y	Y	A	Q	V	I	A	R	L	A	E	Q	G	A	Q	G	V	I	F	G	S	T	E	I	G	L	L	V	P	E	E	R	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	G	G	G	T																				T	T								S	T	T	S	T	T	T	S		G	G	G		S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Sequence	L	P	V	F	D	T	A	A	I	H	A	E	D	A	V	A	F	M	L	S	L	E	H	H	H	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																		T	T		G	G	G