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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5eksB_

Fold library idPDB HeaderMoleculeTitle
c5eksB_PDB header: lyaseChain: B: PDB Molecule: 3-dehydroquinate synthase;PDBTitle: structure of 3-dehydroquinate synthase from acinetobacter baumannii in2 complex with nad


Added to library: Sat Dec 5 08:16:07 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence HHMQTLHVELRRYPIFIGSQLDPKQLLEPYIHGQQVMIVSNVTVAPLYLSHYQEALESLGKTVATCILPD
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Known secondary structure (DSSP)




SS

GGG

SSTTT

S
 .........80.........90.........100.........110.........120.........130.........140
Sequence GEKYKDIQHLNLIFDALLEAGFNRDCTVLALGGGVIGDMAGFASACFQRGVYFVQVPTTLLSQVDSSVGG
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Known secondary structure (DSSP) SGGG
STT

TT
SGGG


STTTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence KTGINHPLGKNMLGAFQQPQVVLADMAQLNTLPERELSAGLAEVIKYALLGDEDFLVWLEENMDGLVARD
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Known secondary structure (DSSP) TT


S
GGGGGGS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence ADLLAEAVYRSCAHKARIVANDEERALLNLGHTFGHAIESYLGYGTWLHGEAVATGMVMAADLSQRLGWI
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Known secondary structure (DSSP)

GGGGGTT
TTSS
TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence SNEDVARTKKIIQRANLPISCPQIPLDDFLGYMAHDKKVGQLRLVLLKQLGQAVITKDFDVELMKQAILA
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Known secondary structure (DSSP)
TT

S
B



T






TTS


T
 ....
Sequence NQHG
Predicted secondary structure

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Known secondary structure (DSSP) TB


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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