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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5egiB_

Fold library idPDB HeaderMoleculeTitle
c5egiB_3.30PDB header: membrane proteinChain: B: PDB Molecule: uncharacterized protein y57a10a.10;


Added to library: Thu Feb 9 11:02:46 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DQEILLDAGAQLHRLKMYPYFDVAHYLLMIIEVRDDLGSAASIFSRKHPLSCWLSSMLMCFADAFLANFL
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Known secondary structure (DSSP)



TTTGGG
S
 .........80.........90.........100.........110.........120.........130.........140
Sequence LGEPVIAPFKRHDDIILATIIWYLVFYAPFDGIYKIAKITPVKCVLAVMKEVKRAYKVSHGVSHAAKLYP
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Known secondary structure (DSSP) TS
TTGGGS

GGGTS
T
 .........150.........160.........170.........180.........190.........200.........210
Sequence NSYIVQVLVGTAKGAGSGIVRTLEQLVRGVWLPTHNELLRPSFATKACVVAASVLALEKSGTYLTAPHDL
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Known secondary structure (DSSP) T
TT






SSS
T
TT

S
 .........220.........230...
Sequence VYLVIVGFFVYFKLSAVILHVTD
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Known secondary structure (DSSP) T


Download:PDB structure FASTA sequence

Hidden Markov model

View in Jmol



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Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Michael Sternberg 
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