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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5efrA_

Fold library idPDB HeaderMoleculeTitle
c5efrA_2.00PDB header: cell adhesionChain: A: PDB Molecule: bama-bamd fusion protein;


Added to library: Sat Jan 30 09:04:14 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SYYIRNIEWEGNTVFPDEALTEALGFKKGDPFNRKKLEENLYGNKRSTDVSSLYMNRGYMLFRAEPTIRV
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Known secondary structure (DSSP)

S

SS
T

TT
B



TTS
STTT
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence VGGDSLDLHFDVYEGDVFEFGTINIVGNQKTKEHVIRRELYTIPGQTFSRDAIQESIRRLAQLNYFNQEA
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Known secondary structure (DSSP)
STT






SSS
TT
S

TTSB

T
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence LAAGPEVQINPEKKTVDLTYKVEEVGRHSSPQEAFERAMEFYNQGKYDRAIEYFKAVFTYGRTHEWAADA
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Known secondary structure (DSSP)

TTTT

B



SST
GGG
SSSTT
 .........220.........230.........240.........250.........260.........270.........280
Sequence QFYLARAYYQNKEYLLAASEYERFIQIYQIDPRVPQAEYERAMCYYKLSPPYELDQTDTRKAIEAFQLFI
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Known secondary structure (DSSP) TT
STTSTT


TTS

 .........290.........300.........310.........320.........330.........340.........350
Sequence DRYPNHELVDDATQKIRELRAKLARKQYEAARLYERRELYEAAAVTYEAVFDAYPDTPWADDALVGAMRA
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Known secondary structure (DSSP)
TTSTTTT

TTST
 .........360.........370.........380.........390.........400...
Sequence YIAYAEQSVRARQPERYRRAVELYERLLQIFPDSPLLRTAEELYTRARQRLTE
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Known secondary structure (DSSP) TS
GGG
TT
TT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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