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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ef4A_

Fold library idPDB HeaderMoleculeTitle
c5ef4A_2.05PDB header: allergenChain: A: PDB Molecule: cysteine protease;


Added to library: Sat Apr 30 08:40:15 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence SHHHHHHSHMFHYHERELESEEGFMGMYDRWREQHNIEMRSPERFNVFKYNVRRIHESNKMDKPYKLKVN
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Known secondary structure (DSSP)
TT

S







GGGGGSTT




TTS

S


 .........80.........90.........100.........110.........120.........130.........140
Sequence EFADMTNLEFVNTYANSKISHFQALRGSAPGSKDFIYANVTKIPDKVDWREKNAVTDVKGQGGCGSCWAF
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Known secondary structure (DSSP) TTTTS
S


S

TT



TTTT




S
GGGGT





B
TTSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AAVVALEGINAIRTGKLVKFSEQQLVDCDMTNAGCDGGLMEPAFTYVIKHGGIAPEASYPYVGKRETCDK
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Known secondary structure (DSSP) S



B

TTS
GGG


TT
B
BTTTS


SS




G
 .........220.........230.........240.........250.........260.........270.........280
Sequence AKIKDVLKIDGRQNVPGLDEEALRKAVAHQPVATGIQLSGHGLQFYSEGVYTGDCGTEPNHGVGIVGYGE
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Known secondary structure (DSSP) GG

S
B




SS
TTS



SS
S


SS

 .........290.........300.........310.........320........
Sequence NEKGIKFWTVKNSWGPTWGEKGYIHLQRGARKEGLCGVAMHSSFPIMN
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Known secondary structure (DSSP)
TTS

SB
TTSTBTTSSSSTT
GGGTTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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