PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.0

Fold library entry viewer: c5eesA_

Fold library id	PDB Header	Molecule	Title
c5eesA_	PDB header: oxidoreductase	Chain: A: PDB Molecule: 4-hydroxy-tetrahydrodipicolinate reductase;	PDBTitle: crystal strcuture of dapb in complex with nadp+ from corynebacterium2 glutamicum

Links to external resources
Added to library: Sat Nov 14 08:20:59 2015

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G I K V G V L G A K G R V G Q T I V A A V N E S D D L E L V A E I G V D D D L S L L V D N G A E V V V D F T T P N A V M G N L E F C I N N G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
S S
T T S
T T T
S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I S A V V G T T G F D D A R L E Q V R D W L E G K D N V G V L I A P N F A I S A V L T M V F S K Q A A R F F E S A E V I E L H H P N K L D A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S
G G G
S
T T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P S G T A I H T A Q G I A A A R K E A G M D A Q P D A T E Q A L E G S R G A S V D G I P V H A V R M S G M V A H E Q V I F G T Q G Q T L T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S S
T T T T
T T
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . .

Sequence K Q D S Y D R N S F A P G V L V G V R N I A Q H P G L V V G L E H Y L G L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
G G G
S G G G G S

Download: PDB structure FASTA sequence
Hidden Markov model

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	I	K	V	G	V	L	G	A	K	G	R	V	G	Q	T	I	V	A	A	V	N	E	S	D	D	L	E	L	V	A	E	I	G	V	D	D	D	L	S	L	L	V	D	N	G	A	E	V	V	V	D	F	T	T	P	N	A	V	M	G	N	L	E	F	C	I	N	N	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T	T	S														S	S									T	T	S		T						T	T		S						S															T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	S	A	V	V	G	T	T	G	F	D	D	A	R	L	E	Q	V	R	D	W	L	E	G	K	D	N	V	G	V	L	I	A	P	N	F	A	I	S	A	V	L	T	M	V	F	S	K	Q	A	A	R	F	F	E	S	A	E	V	I	E	L	H	H	P	N	K	L	D	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							T	T		T	T							S																	G	G	G		S										T	T			S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	G	T	A	I	H	T	A	Q	G	I	A	A	A	R	K	E	A	G	M	D	A	Q	P	D	A	T	E	Q	A	L	E	G	S	R	G	A	S	V	D	G	I	P	V	H	A	V	R	M	S	G	M	V	A	H	E	Q	V	I	F	G	T	Q	G	Q	T	L	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																		T	T									S	S			T	T	T	T					T	T									T	T												T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Sequence	K	Q	D	S	Y	D	R	N	S	F	A	P	G	V	L	V	G	V	R	N	I	A	Q	H	P	G	L	V	V	G	L	E	H	Y	L	G	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S														G	G	G							S	G	G	G	G	S