PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c5edfA_

Fold library id	PDB Header	Molecule	Title
c5edfA_	1.40	PDB header: unknown function	Chain: A: PDB Molecule: frpc operon protein;

Links to external resources
Added to library: Thu Feb 9 11:05:44 2017

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E Q T S F N N P E P X T G F E H T V T F D F Q G T K X V I P Y G Y L A R Y T Q D N A T K W L S D T P G Q D A Y S I N L I E I S V Y Y K K T D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S S S
S
T T G G G
T T S T T T T
T T
S
S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q G W V L E P Y N Q Q N K A H F I Q F L R D G L D S V D D I V I R K D A C S L S T T X G E R L L T Y G V K K X P S A Y P E Y E A Y E D K R H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T T T S
S S
T T T T
S S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I P E N P Y F H E F Y Y I K K G E N P A I I T H R N N R I N Q T E E D S Y S T S V G S C I N G F T V Q Y Y P F I R E K Q Q L T Q Q E L V G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T
S S S
S S S S
T T
S T T
S

. . . . . . . . . 220 . . . .

Sequence H Q Q V E Q L V Q S F V N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	Q	T	S	F	N	N	P	E	P	X	T	G	F	E	H	T	V	T	F	D	F	Q	G	T	K	X	V	I	P	Y	G	Y	L	A	R	Y	T	Q	D	N	A	T	K	W	L	S	D	T	P	G	Q	D	A	Y	S	I	N	L	I	E	I	S	V	Y	Y	K	K	T	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							B				S	S	S		S								T	T							G	G	G		T	T	S			T	T	T	T							T	T		S					S												T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	G	W	V	L	E	P	Y	N	Q	Q	N	K	A	H	F	I	Q	F	L	R	D	G	L	D	S	V	D	D	I	V	I	R	K	D	A	C	S	L	S	T	T	X	G	E	R	L	L	T	Y	G	V	K	K	X	P	S	A	Y	P	E	Y	E	A	Y	E	D	K	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T							S		T	T	T											S		S	S															T	T								T	T							S	S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	P	E	N	P	Y	F	H	E	F	Y	Y	I	K	K	G	E	N	P	A	I	I	T	H	R	N	N	R	I	N	Q	T	E	E	D	S	Y	S	T	S	V	G	S	C	I	N	G	F	T	V	Q	Y	Y	P	F	I	R	E	K	Q	Q	L	T	Q	Q	E	L	V	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		T	T										S	S	S												S	S	S	S													T	T								S	T	T			S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.
Sequence	H	Q	Q	V	E	Q	L	V	Q	S	F	V	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)