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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ed8A_

Fold library idPDB HeaderMoleculeTitle
c5ed8A_2.50PDB header: transport proteinChain: A: PDB Molecule: mkiaa0668 protein;


Added to library: Sat Jan 16 08:36:02 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence RSGLLQRDEMHAQLQELENKILTKMAEMQGKSAREAAASLGQILQKEGIVGVTEEQVHRIVKQALQRYSE
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Known secondary structure (DSSP)




SS
SGGGTTS
TTT

S


TTS


 .........80.........90.........100.........110.........120.........130.........140
Sequence DRIGMVDYALESGGASVISTRCSETYETKTALLSLFGIPLWYHSQSPRVILQPDVHPGNCWAFQGPQGFA
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Known secondary structure (DSSP)



S

TT
GGGT

GGGS

B



TTS

B
GGGGGSS

STT
SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence VVRLSARIRPTAVTLEHVPKALSPNSTISSAPKDFAIFGFDEDLQQEGTLLGTFAYDQDGEPIQTFYFQA
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Known secondary structure (DSSP)


GGGSGGG

TTSB
SSTT





TTS
S

T
 .........220.........230.........240.....
Sequence SKMATYQVVELRILTNWGHPEYTCIYRFRVHGEPA
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Known secondary structure (DSSP) T





BSS
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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