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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ebzF_

Fold library idPDB HeaderMoleculeTitle
c5ebzF_4.50PDB header: transferase/transferase inhibitorChain: F: PDB Molecule: inhibitor of nuclear factor kappa-b kinase subunit alpha;


Added to library: Thu Feb 9 22:26:51 2017
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPEFGAGGPWEMRERLGTGGFGNVCLYQHRELDLKIAIKSCRLELSTKNRERWCHEIQIMKKLNHANVVK
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Known secondary structure (DSSP)

S



SS
SSSSTT

SSSS





SS



SSSB

 .........80.........90.........100.........110.........120.........130.........140
Sequence ACDVPEELNILIHDVPLLAMEYCSGGDLRKLLNKPENCCGLKESQILSLLSDIGSGIRYLHENKIIHRDL
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Known secondary structure (DSSP)

SS
S

TT
STT





TT


GGGSS


TTT



 .........150.........160.........170.........180.........190.........200.........210
Sequence KPENIVLQDVGGKIIHKIIDLGYAKDVDQGELCTEFVGTLQYLAPELFENKPYTATVDYWSFGTMVFECI
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Known secondary structure (DSSP)
GGG
STTS



SS
SSSSS
S
S

SS

SS
TTTTTTS


ST
 .........220.........230.........240.........250.........260.........270.........280
Sequence AGYRPFLHHLQPFTWHEKIKKKDPKCIFACEEMSGEVRFSSHLPQPNSLCSLIVEPMENWLQLMLNWDPQ
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Known secondary structure (DSSP) SS
SSSTT

TTTTTTTTTT

TT

B

B
TTS
B

BSS

SS

S
TTTS
SSST
 .........290.........300.........310.........320.........330.........340.........350
Sequence QRGGPVDLTLKQPRCFVLMDHILNLKIVHILNMTSAKIISFLLPPDESLHSLQSRIERETGINTGSQELL
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Known secondary structure (DSSP) TTT
STTTTS


TTTT


SS

TTT


TTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SETGISLDPRKPASQCVLDGVRGCDSYMVYLFDKSKTVYEGPFASRSLSDCVNYIVQDSKIQLPIIQLRK
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Known secondary structure (DSSP)
TT




SSS
S
SS


SS

SSS

SS
SS









T
S


B
 .........430.........440.........450.........460.........470.........480.........490
Sequence VWAEAVHYVSGLKEDYSRLFQGQRAAMLSLLRYNANLTKMKNTLISASQQLKAKLEFFHKSIQLDLERYS
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Known secondary structure (DSSP)
 .........500.........510.........520.........530.........540.........550.........560
Sequence EQMTYGISSEKMLKAWKEMEEKAIHYAEVGVIGYLEDQIMSLHAEIMELQKSPYGRRQGDLMESLEQRAI
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Known secondary structure (DSSP) TSSSSS


SS


TTTTTTSS

SGGG
 .........570.........580.........590.........600.........610.........620.........630
Sequence DLYKQLKHRPSDHSYSDSTEMVKIIVHTVQSQDRVLKELFGHLSKLLGCKQKIIDLLPKVEVALSNIKEA
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Known secondary structure (DSSP) SSS

SS
B

TT
 .........640.........650.....
Sequence DNTVMFMQGKRQKEIWHLLKIACTQ
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Known secondary structure (DSSP) TTTTTTTTTTTSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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