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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5ebbA_

Fold library idPDB HeaderMoleculeTitle
c5ebbA_2.60PDB header: hydrolaseChain: A: PDB Molecule: acid sphingomyelinase-like phosphodiesterase 3a;


Added to library: Sat Jan 23 08:31:30 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPAIGQFWHVTDLHLDPTYHITDDHTKVCASSKGANASNPGPFGDVLCDSPYQLILSAFDFIKNSGQEAS
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Known secondary structure (DSSP)

S




B
TT



S
GGGS
GGGTTS

SS
BTTB
TTS
B
TT


S
 .........80.........90.........100.........110.........120.........130.........140
Sequence FMIWTGDSPPHVPVPELSTDTVINVITNMTTTIQSLFPNLQVFPALGNHDYWPQDQLPVVTSKVYNAVAN
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Known secondary structure (DSSP)



S



GGG


TT




TTSSSSTT


SS

 .........150.........160.........170.........180.........190.........200.........210
Sequence LWKPWLDEEAISTLRKGGFYSQKVTTNPNLRIISLNTNLYYGPNIMTLNKTDPANQFEWLESTLNNSQQN
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Known secondary structure (DSSP) TTTS
S
TT

GGGGBTT
GGGTT
SSGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KEKVYIIAHVPVGYLPSSQNITAMREYYNEKLIDIFQKYSDVIAGQFYGHTHRDSIMVLSDKKGSPVNSL
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Known secondary structure (DSSP) T

SS
SSB
TTSSS
BSB
TTTT
SS
S

TTS
 .........290.........300.........310.........320.........330.........340.........350
Sequence FVAPAVTPVKSVLEKQTNNPGIRLFQYDPRDYKLLDMLQYYLNLTEANLKGESIWKLEYILTQTYDIEDL
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Known secondary structure (DSSP)


S




TT
S





TTT


T


T
S
S
 .........360.........370.........380.........390.........400.........410
Sequence QPESLYGLAKQFTILDSKQFIKYYNYFFVSYDSSVTCDKTCKAFQICAIMNLDNISYADC
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Known secondary structure (DSSP) STSTT
TTTS
TT





S


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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