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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5eaxB_

Fold library idPDB HeaderMoleculeTitle
c5eaxB_PDB header: hydrolase/dnaChain: B: PDB Molecule: dna replication atp-dependent helicase/nuclease dna2;PDBTitle: crystal structure of dna2 in complex with an ssdna


Added to library: Sat Nov 21 08:51:16 2015
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MEPLDELDLLLLEAVPRVELLRKKADALFPETVLSRGVDNRYLVLAVETSQNERGAEEKRLHVTASQDRE
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Known secondary structure (DSSP)

S




STT


B
STT
BTTTSSSSTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence HEVLCILRNGWSSVPVEPGDIVHLEGDCTSEPWIIDDDFGYFILYPDMMISGTSVASSIRCLRRAVLSET
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Known secondary structure (DSSP)

TTGGGS


TT

SS
SS


SSS

STTS

 .........150.........160.........170.........180.........190.........200.........210
Sequence FRGSDPATRQMLIGTILHEVFQKAISESFAPERLQELALQTLREVRHLKEMYRLNLSQDEILCEVEEYLP
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Known secondary structure (DSSP) SGGGS


S


TTSTT

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence SFSKWAEDFMRKGPSSEFPQMQLSLPSDGRSSPCNIEVVKSLDIEESIWSPRFGLKGKIAVTVGVKIHRD
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Known secondary structure (DSSP) S

S
GGGS




SS



S
TTTTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence CKMKYKVMPLELKTGKESNSIEHRSQVVLYTLLSQERREDPEAGWLLYLKTGQMYPVPANHLDKRELLKL
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Known secondary structure (DSSP) T


S
S


TTSS




TTTT



 .........360.........370.........380.........390.........400.........410.........420
Sequence RNWLAASLLHRVSRAAPGEEARLSALPQIIEEEKTCKYCSQIGNCALYSRAVEEDDASIPEAMLSKIQEE
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Known secondary structure (DSSP)

B

SSTTS


B


S


S
TS
SSS





S
 .........430.........440.........450.........460.........470.........480.........490
Sequence TRHLQLAHLKYFSLWCLMLTLESQSKDNRKTHQSIWLTPASELEESGNCVGNLVRTEPVSRVCDGQYLHN
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Known secondary structure (DSSP) TT

SGGGG

TTS
TSSS





S

TT
 .........500.........510.........520.........530.........540.........550.........560
Sequence FQRKNGPMPATNLMAGDRIILSGEERKLFALSKGYVKKMNKAAVTCLLDRNLSTLPATTVFRLDREERHG
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Known secondary structure (DSSP) SSS



SS

TT


SSGGG
S

SSSS


SS
SS







SG
 .........570.........580.........590.........600.........610.........620.........630
Sequence DISTPLGNLSKLMESTDPSKRLRELIIDFREPQFIAYLSSVLPHDAKDTVANILKGLNKPQRQAMKRVLL
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Known secondary structure (DSSP) GGS
STS




B



GGGS
TTTS
 .........640.........650.........660.........670.........680.........690.........700
Sequence SKDYTLIVGMPGTGKTTTICALVRILSACGFSVLLTSYTHSAVDNILLKLAKFKVGFLRLGQSHKVHPDI
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Known secondary structure (DSSP) BSS
TTS
TT

SSTT



S
TTTS
GGG
 .........710.........720.........730.........740.........750.........760.........770
Sequence QKFTEEEICRSRSIASLAHLEELYNSHPIVATTCMGINHPIFSRKTFDFCIVDEASQISQPVCLGPLFFS
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Known secondary structure (DSSP) GGGBTT

S
STT
TTSGGGGT

TTTTTS
TGGGGG
 .........780.........790.........800.........810.........820.........830.........840
Sequence RRFVLVGDHQQLPPLVVNREARALGMSESLFKRLERNESAVVQLTVQYRMNRKIMSLSNKLTYAGKLECG
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Known secondary structure (DSSP)
TTS






TTT

GGG
GGG
SSS
TSTT

S
 .........850.........860.........870.........880.........890.........900.........910
Sequence SDRVANAVLALPNLKDARLSLQLYADYSDSPWLAGVLEPDNPVCFLNTDKVPAPEQVENGGVSNVTEARL
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Known secondary structure (DSSP)





TT
TTTS
SS

TT


SSS



TT
 .........920.........930.........940.........950.........960.........970.........980
Sequence IVFLTSTFIKAGCSPSDIGVIAPYRQQLRIISDLLARSSVGMVEVNTVDKYQGRDKSLILVSFVRSNEDG
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Known secondary structure (DSSP) TT

GGG
S
TT


S
SGGGTT






SSS
 .........990.........1000.........1010.........1020.........1030.........1040......
Sequence TLGELLKDWRRLNVALTRAKHKLILLGSVSSLKRFPPLGTLFDHLNAEQLILDLPSREHESLSHIL
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Known secondary structure (DSSP)


SGGG
TTS
TTSTT



TTSTTTTTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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