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 Protein Homology/analogY Recognition Engine V 2.0


 

Fold library entry viewer: c5e6wA_

Fold library idPDB HeaderMoleculeTitle
c5e6wA_2.20PDB header: cell adhesionChain: A: PDB Molecule: integrin beta-2;


Added to library: Sat Mar 5 09:37:10 2016
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence QECTKFKVSSCRECIESGPGCTWCQKLNFTGPGDPDSIRCDTRPQLLMRGCAADDIMDPTSLAETQEDQK
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Known secondary structure (DSSP)




SS

S
TT


GGG

TT

GGGG
TT

GGG







 .........80.........90.........100.........110.........120.........130.........140
Sequence QLSPQKVTLYLRPGQAAAFNVTFRRAKLSSRVFLDHNALPDTLKVTYDSFCSNGVTHRNQPRGDCDGVQI
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Known secondary structure (DSSP) S
S
TT


BSS




TT
SSS
SS
B
 .........150.........160.........170.........180.........190.........200.........210
Sequence NVPITFQVKVTATECIQEQSFVIRALGFTDIVTVQVLPQCECRCRDQSRSLCHGKGFLECGICRCDTGYI
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Known secondary structure (DSSP) T

SS


STT
S












TTTTSTT
TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence GKNCECQTQGRSQELEGSCRKDNNSIICSGLGDCVCGQCLCHTSDVPGKLIYGQYCECDTINCERYNGQV
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Known secondary structure (DSSP) STTS







TTGGGBSSTTS
BGGGSTT


SSTT


BSTTS
B
SS
S
TT
 .........290.........300.........310
Sequence CGGPGRGLCFCGKCRCHPGFEGSACQHHHH
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Known secondary structure (DSSP) TT
TTTTT
TT
BSTTS
BS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg 
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